Gene : Phvul.002G191400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR33133:SF12 - F28K20.6 PROTEIN-RELATED Genomic Order:  1893
Name:  ? Phvul.002G191400 Secondary Identifier:  ? PAC:37175943
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G191400 0.5kb upstream 0.5kb upstream 4295 true Chr02: 35539997-35544291 Phaseolus vulgaris
Phvul.002G191400 0.5kb upstream 0.5kb upstream 500 false Chr02: 35543792-35544291 Phaseolus vulgaris
Phvul.002G191400 0.5kb downstream 0.5kb downstream 4295 true Chr02: 35539497-35543791 Phaseolus vulgaris
Phvul.002G191400 0.5kb downstream 0.5kb downstream 500 false Chr02: 35539497-35539996 Phaseolus vulgaris
Phvul.002G191400 1.0kb upstream 1.0kb upstream 4795 true Chr02: 35539997-35544791 Phaseolus vulgaris
Phvul.002G191400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 35543792-35544791 Phaseolus vulgaris
Phvul.002G191400 1.0kb downstream 1.0kb downstream 4795 true Chr02: 35538997-35543791 Phaseolus vulgaris
Phvul.002G191400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 35538997-35539996 Phaseolus vulgaris
Phvul.002G191400 2.0kb upstream 2.0kb upstream 5795 true Chr02: 35539997-35545791 Phaseolus vulgaris
Phvul.002G191400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 35543792-35545791 Phaseolus vulgaris
Phvul.002G191400 2.0kb downstream 2.0kb downstream 5795 true Chr02: 35537997-35543791 Phaseolus vulgaris
Phvul.002G191400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 35537997-35539996 Phaseolus vulgaris
Phvul.002G191400 5.0kb upstream 5.0kb upstream 8795 true Chr02: 35539997-35548791 Phaseolus vulgaris
Phvul.002G191400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 35543792-35548791 Phaseolus vulgaris
Phvul.002G191400 5.0kb downstream 5.0kb downstream 8795 true Chr02: 35534997-35543791 Phaseolus vulgaris
Phvul.002G191400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 35534997-35539996 Phaseolus vulgaris
Phvul.002G191400 10.0kb upstream 10.0kb upstream 13795 true Chr02: 35539997-35553791 Phaseolus vulgaris
Phvul.002G191400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 35543792-35553791 Phaseolus vulgaris
Phvul.002G191400 10.0kb downstream 10.0kb downstream 13795 true Chr02: 35529997-35543791 Phaseolus vulgaris
Phvul.002G191400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 35529997-35539996 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308280 5265 Fabidae View MSA
124072395 5270 Rosid View MSA
123752432 5271 Pentapetalae View MSA
122795545 5272 Eudicot View MSA
122047131 5273 Angiosperm View MSA
121347581 5274 Embryophyte View MSA
123380576 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 78.0064 0.0 247.968 High  
cufflinks 72.4397 0.0 228.586 High  
cufflinks 48.9905 0.0 151.729 High Low
cufflinks 107.694 0.0 373.774 High High
cufflinks 89.2538 0.0 295.803 High  
cufflinks 80.0507 0.0 253.914 High  
cufflinks 63.1556 0.0 202.178 High  
cufflinks 50.3388 0.0 157.016 High Low
cufflinks 93.5515 0.0 304.767 High  
cufflinks 77.0384 0.0 247.05 High  
cufflinks 109.615 0.0 375.419 High High

0 Strain