Gene : Phvul.002G194800 P. vulgaris v2.1
Defline:  (1 of 1) PF04481 - Protein of unknown function (DUF561) (DUF561) Genomic Order:  1929
Name:  ? Phvul.002G194800 Secondary Identifier:  ? PAC:37178722
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G194800 0.5kb upstream 0.5kb upstream 4316 true Chr02: 35874369-35878684 Phaseolus vulgaris
Phvul.002G194800 0.5kb upstream 0.5kb upstream 500 false Chr02: 35874369-35874868 Phaseolus vulgaris
Phvul.002G194800 0.5kb downstream 0.5kb downstream 4316 true Chr02: 35874869-35879184 Phaseolus vulgaris
Phvul.002G194800 0.5kb downstream 0.5kb downstream 500 false Chr02: 35878685-35879184 Phaseolus vulgaris
Phvul.002G194800 1.0kb upstream 1.0kb upstream 4816 true Chr02: 35873869-35878684 Phaseolus vulgaris
Phvul.002G194800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 35873869-35874868 Phaseolus vulgaris
Phvul.002G194800 1.0kb downstream 1.0kb downstream 4816 true Chr02: 35874869-35879684 Phaseolus vulgaris
Phvul.002G194800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 35878685-35879684 Phaseolus vulgaris
Phvul.002G194800 2.0kb upstream 2.0kb upstream 5816 true Chr02: 35872869-35878684 Phaseolus vulgaris
Phvul.002G194800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 35872869-35874868 Phaseolus vulgaris
Phvul.002G194800 2.0kb downstream 2.0kb downstream 5816 true Chr02: 35874869-35880684 Phaseolus vulgaris
Phvul.002G194800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 35878685-35880684 Phaseolus vulgaris
Phvul.002G194800 5.0kb upstream 5.0kb upstream 8816 true Chr02: 35869869-35878684 Phaseolus vulgaris
Phvul.002G194800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 35869869-35874868 Phaseolus vulgaris
Phvul.002G194800 5.0kb downstream 5.0kb downstream 8816 true Chr02: 35874869-35883684 Phaseolus vulgaris
Phvul.002G194800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 35878685-35883684 Phaseolus vulgaris
Phvul.002G194800 10.0kb upstream 10.0kb upstream 13816 true Chr02: 35864869-35878684 Phaseolus vulgaris
Phvul.002G194800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 35864869-35874868 Phaseolus vulgaris
Phvul.002G194800 10.0kb downstream 10.0kb downstream 13816 true Chr02: 35874869-35888684 Phaseolus vulgaris
Phvul.002G194800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 35878685-35888684 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026778 5273 Angiosperm View MSA
122306010 5265 Fabidae View MSA
124050560 5270 Rosid View MSA
123742287 5271 Pentapetalae View MSA
122794351 5272 Eudicot View MSA
121348425 5274 Embryophyte View MSA
123380861 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.5511 0.0 124.039 High  
cufflinks 50.895 0.0 164.77 High  
cufflinks 51.8908 0.0 166.172 High  
cufflinks 31.8306 0.0 89.5222    
cufflinks 27.3808 0.0 88.8065    
cufflinks 94.5668 0.0 329.135 High  
cufflinks 0.125158 0.0 0.537593 Low Low
cufflinks 0.297376 0.0 1.17743 Low Low
cufflinks 0.334345 0.0 1.31405 Low Low
cufflinks 63.4648 0.0 207.149 High  
cufflinks 20.6354 0.0 71.9143    

0 Strain