Gene : Phvul.002G194100 P. vulgaris v2.1
Genomic Order:  1921 Name:  ? Phvul.002G194100
Secondary Identifier:  ? PAC:37176556
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G194100 0.5kb upstream 0.5kb upstream 2729 true Chr02: 35800922-35803650 Phaseolus vulgaris
Phvul.002G194100 0.5kb upstream 0.5kb upstream 500 false Chr02: 35800922-35801421 Phaseolus vulgaris
Phvul.002G194100 0.5kb downstream 0.5kb downstream 2729 true Chr02: 35801422-35804150 Phaseolus vulgaris
Phvul.002G194100 0.5kb downstream 0.5kb downstream 500 false Chr02: 35803651-35804150 Phaseolus vulgaris
Phvul.002G194100 1.0kb upstream 1.0kb upstream 3229 true Chr02: 35800422-35803650 Phaseolus vulgaris
Phvul.002G194100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 35800422-35801421 Phaseolus vulgaris
Phvul.002G194100 1.0kb downstream 1.0kb downstream 3229 true Chr02: 35801422-35804650 Phaseolus vulgaris
Phvul.002G194100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 35803651-35804650 Phaseolus vulgaris
Phvul.002G194100 2.0kb upstream 2.0kb upstream 4229 true Chr02: 35799422-35803650 Phaseolus vulgaris
Phvul.002G194100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 35799422-35801421 Phaseolus vulgaris
Phvul.002G194100 2.0kb downstream 2.0kb downstream 4229 true Chr02: 35801422-35805650 Phaseolus vulgaris
Phvul.002G194100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 35803651-35805650 Phaseolus vulgaris
Phvul.002G194100 5.0kb upstream 5.0kb upstream 7229 true Chr02: 35796422-35803650 Phaseolus vulgaris
Phvul.002G194100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 35796422-35801421 Phaseolus vulgaris
Phvul.002G194100 5.0kb downstream 5.0kb downstream 7229 true Chr02: 35801422-35808650 Phaseolus vulgaris
Phvul.002G194100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 35803651-35808650 Phaseolus vulgaris
Phvul.002G194100 10.0kb upstream 10.0kb upstream 12229 true Chr02: 35791422-35803650 Phaseolus vulgaris
Phvul.002G194100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 35791422-35801421 Phaseolus vulgaris
Phvul.002G194100 10.0kb downstream 10.0kb downstream 12229 true Chr02: 35801422-35813650 Phaseolus vulgaris
Phvul.002G194100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 35803651-35813650 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304660 5265 Fabidae View MSA
124068135 5270 Rosid View MSA
123737806 5271 Pentapetalae View MSA
122789771 5272 Eudicot View MSA
122045732 5273 Angiosperm View MSA
121351447 5274 Embryophyte View MSA
123382171 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.4796 0.0 26.5744   High
cufflinks 9.59623 0.0 26.9091   High
cufflinks 5.4789 0.0 16.2266    
cufflinks 11.0255 0.0 30.7996   High
cufflinks 4.74832 0.0 14.4846    
cufflinks 5.46543 0.0 16.2099    
cufflinks 3.71661 0.0 11.543   Low
cufflinks 5.36187 0.0 15.8078    
cufflinks 4.00961 0.0 12.394   Low
cufflinks 4.71676 0.0 14.3098    
cufflinks 4.94858 0.0 15.0047    

0 Strain