Gene : Phvul.002G194300 P. vulgaris v2.1
Defline:  (1 of 2) 2.3.1.41 - Beta-ketoacyl-[acyl-carrier-protein] synthase I / KAS I Genomic Order:  1923
Name:  ? Phvul.002G194300 Secondary Identifier:  ? PAC:37177751
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris FASYN-ELONG-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-5156 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5971 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5989 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6282 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7388 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7663 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G194300 0.5kb upstream 0.5kb upstream 6781 true Chr02: 35811370-35818150 Phaseolus vulgaris
Phvul.002G194300 0.5kb upstream 0.5kb upstream 500 false Chr02: 35817651-35818150 Phaseolus vulgaris
Phvul.002G194300 0.5kb downstream 0.5kb downstream 6781 true Chr02: 35810870-35817650 Phaseolus vulgaris
Phvul.002G194300 0.5kb downstream 0.5kb downstream 500 false Chr02: 35810870-35811369 Phaseolus vulgaris
Phvul.002G194300 1.0kb upstream 1.0kb upstream 7281 true Chr02: 35811370-35818650 Phaseolus vulgaris
Phvul.002G194300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 35817651-35818650 Phaseolus vulgaris
Phvul.002G194300 1.0kb downstream 1.0kb downstream 7281 true Chr02: 35810370-35817650 Phaseolus vulgaris
Phvul.002G194300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 35810370-35811369 Phaseolus vulgaris
Phvul.002G194300 2.0kb upstream 2.0kb upstream 8281 true Chr02: 35811370-35819650 Phaseolus vulgaris
Phvul.002G194300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 35817651-35819650 Phaseolus vulgaris
Phvul.002G194300 2.0kb downstream 2.0kb downstream 8281 true Chr02: 35809370-35817650 Phaseolus vulgaris
Phvul.002G194300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 35809370-35811369 Phaseolus vulgaris
Phvul.002G194300 5.0kb upstream 5.0kb upstream 11281 true Chr02: 35811370-35822650 Phaseolus vulgaris
Phvul.002G194300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 35817651-35822650 Phaseolus vulgaris
Phvul.002G194300 5.0kb downstream 5.0kb downstream 11281 true Chr02: 35806370-35817650 Phaseolus vulgaris
Phvul.002G194300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 35806370-35811369 Phaseolus vulgaris
Phvul.002G194300 10.0kb upstream 10.0kb upstream 16281 true Chr02: 35811370-35827650 Phaseolus vulgaris
Phvul.002G194300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 35817651-35827650 Phaseolus vulgaris
Phvul.002G194300 10.0kb downstream 10.0kb downstream 16281 true Chr02: 35801370-35817650 Phaseolus vulgaris
Phvul.002G194300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 35801370-35811369 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307628 5265 Fabidae View MSA
124064004 5270 Rosid View MSA
123747178 5271 Pentapetalae View MSA
122792015 5272 Eudicot View MSA
122044089 5273 Angiosperm View MSA
121347391 5274 Embryophyte View MSA
123426303 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.1281 0.0 62.4377    
cufflinks 53.1672 0.0 142.984 High  
cufflinks 65.6575 0.0 179.311 High  
cufflinks 78.8854 0.0 221.194 High High
cufflinks 45.191 0.0 120.311 High  
cufflinks 53.1838 0.0 143.011 High  
cufflinks 24.2369 0.0 62.7536    
cufflinks 24.8944 0.0 64.4307    
cufflinks 45.1936 0.0 120.265 High  
cufflinks 8.77574 0.0 23.4947   Low
cufflinks 40.7051 0.0 107.514 High  

0 Strain