Gene : Phvul.002G183900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10209//PTHR10209:SF176 - OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1820
Name:  ? Phvul.002G183900 Secondary Identifier:  ? PAC:37177197
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G183900 0.5kb upstream 0.5kb upstream 10684 true Chr02: 34428903-34439586 Phaseolus vulgaris
Phvul.002G183900 0.5kb upstream 0.5kb upstream 500 false Chr02: 34439087-34439586 Phaseolus vulgaris
Phvul.002G183900 0.5kb downstream 0.5kb downstream 10684 true Chr02: 34428403-34439086 Phaseolus vulgaris
Phvul.002G183900 0.5kb downstream 0.5kb downstream 500 false Chr02: 34428403-34428902 Phaseolus vulgaris
Phvul.002G183900 1.0kb upstream 1.0kb upstream 11184 true Chr02: 34428903-34440086 Phaseolus vulgaris
Phvul.002G183900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 34439087-34440086 Phaseolus vulgaris
Phvul.002G183900 1.0kb downstream 1.0kb downstream 11184 true Chr02: 34427903-34439086 Phaseolus vulgaris
Phvul.002G183900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 34427903-34428902 Phaseolus vulgaris
Phvul.002G183900 2.0kb upstream 2.0kb upstream 12184 true Chr02: 34428903-34441086 Phaseolus vulgaris
Phvul.002G183900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 34439087-34441086 Phaseolus vulgaris
Phvul.002G183900 2.0kb downstream 2.0kb downstream 12184 true Chr02: 34426903-34439086 Phaseolus vulgaris
Phvul.002G183900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 34426903-34428902 Phaseolus vulgaris
Phvul.002G183900 5.0kb upstream 5.0kb upstream 15184 true Chr02: 34428903-34444086 Phaseolus vulgaris
Phvul.002G183900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 34439087-34444086 Phaseolus vulgaris
Phvul.002G183900 5.0kb downstream 5.0kb downstream 15184 true Chr02: 34423903-34439086 Phaseolus vulgaris
Phvul.002G183900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 34423903-34428902 Phaseolus vulgaris
Phvul.002G183900 10.0kb upstream 10.0kb upstream 20184 true Chr02: 34428903-34449086 Phaseolus vulgaris
Phvul.002G183900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 34439087-34449086 Phaseolus vulgaris
Phvul.002G183900 10.0kb downstream 10.0kb downstream 20184 true Chr02: 34418903-34439086 Phaseolus vulgaris
Phvul.002G183900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 34418903-34428902 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312592 5265 Fabidae View MSA
124070161 5270 Rosid View MSA
123753331 5271 Pentapetalae View MSA
122797647 5272 Eudicot View MSA
122051611 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121351374 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0487992 0.0 0.224617 Low  
cufflinks 0.0230669 0.0 0.11521 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.133647 0.0 0.563652 Low  
cufflinks 0.093964 0.0 0.405447 Low  
cufflinks 0.318156 0.0 1.23854 Low  
cufflinks 1.07607 0.0 3.75792   High
cufflinks 0.0590112 0.0 0.266641 Low  
cufflinks 0.0134707 0.0 0.0720534 Low Low
cufflinks 0.408619 0.0 1.56953 Low  

0 Strain