Gene : Phvul.002G184500 P. vulgaris v2.1
Defline:  (1 of 3) PTHR31421:SF0 - PROTEIN BASIC PENTACYSTEINE1-RELATED Genomic Order:  1826
Name:  ? Phvul.002G184500 Secondary Identifier:  ? PAC:37176086
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G184500 0.5kb upstream 0.5kb upstream 2391 true Chr02: 34518080-34520470 Phaseolus vulgaris
Phvul.002G184500 0.5kb upstream 0.5kb upstream 500 false Chr02: 34519971-34520470 Phaseolus vulgaris
Phvul.002G184500 0.5kb downstream 0.5kb downstream 2391 true Chr02: 34517580-34519970 Phaseolus vulgaris
Phvul.002G184500 0.5kb downstream 0.5kb downstream 500 false Chr02: 34517580-34518079 Phaseolus vulgaris
Phvul.002G184500 1.0kb upstream 1.0kb upstream 2891 true Chr02: 34518080-34520970 Phaseolus vulgaris
Phvul.002G184500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 34519971-34520970 Phaseolus vulgaris
Phvul.002G184500 1.0kb downstream 1.0kb downstream 2891 true Chr02: 34517080-34519970 Phaseolus vulgaris
Phvul.002G184500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 34517080-34518079 Phaseolus vulgaris
Phvul.002G184500 2.0kb upstream 2.0kb upstream 3891 true Chr02: 34518080-34521970 Phaseolus vulgaris
Phvul.002G184500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 34519971-34521970 Phaseolus vulgaris
Phvul.002G184500 2.0kb downstream 2.0kb downstream 3891 true Chr02: 34516080-34519970 Phaseolus vulgaris
Phvul.002G184500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 34516080-34518079 Phaseolus vulgaris
Phvul.002G184500 5.0kb upstream 5.0kb upstream 6891 true Chr02: 34518080-34524970 Phaseolus vulgaris
Phvul.002G184500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 34519971-34524970 Phaseolus vulgaris
Phvul.002G184500 5.0kb downstream 5.0kb downstream 6891 true Chr02: 34513080-34519970 Phaseolus vulgaris
Phvul.002G184500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 34513080-34518079 Phaseolus vulgaris
Phvul.002G184500 10.0kb upstream 10.0kb upstream 11891 true Chr02: 34518080-34529970 Phaseolus vulgaris
Phvul.002G184500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 34519971-34529970 Phaseolus vulgaris
Phvul.002G184500 10.0kb downstream 10.0kb downstream 11891 true Chr02: 34508080-34519970 Phaseolus vulgaris
Phvul.002G184500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 34508080-34518079 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299711 5265 Fabidae View MSA
124073198 5270 Rosid View MSA
123750720 5271 Pentapetalae View MSA
122788133 5272 Eudicot View MSA
122049801 5273 Angiosperm View MSA
121311594 5274 Embryophyte View MSA
123348870 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.7384 0.0 70.9975    
cufflinks 20.8721 0.0 65.9317    
cufflinks 20.7772 0.0 65.9014    
cufflinks 18.4323 0.0 59.7214    
cufflinks 21.9595 0.0 69.6014    
cufflinks 22.3101 0.0 70.2475    
cufflinks 20.5399 0.0 65.0367    
cufflinks 22.4544 0.0 70.704    
cufflinks 21.749 0.0 68.7354    
cufflinks 13.9775 0.0 47.0561   Low
cufflinks 27.4402 0.0 84.6069   High

0 Strain