Gene : Phvul.002G185400 P. vulgaris v2.1
Genomic Order:  1833 Name:  ? Phvul.002G185400
Secondary Identifier:  ? PAC:37175209
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G185400 0.5kb upstream 0.5kb upstream 2409 true Chr02: 34762842-34765250 Phaseolus vulgaris
Phvul.002G185400 0.5kb upstream 0.5kb upstream 500 false Chr02: 34764751-34765250 Phaseolus vulgaris
Phvul.002G185400 0.5kb downstream 0.5kb downstream 2409 true Chr02: 34762342-34764750 Phaseolus vulgaris
Phvul.002G185400 0.5kb downstream 0.5kb downstream 500 false Chr02: 34762342-34762841 Phaseolus vulgaris
Phvul.002G185400 1.0kb upstream 1.0kb upstream 2909 true Chr02: 34762842-34765750 Phaseolus vulgaris
Phvul.002G185400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 34764751-34765750 Phaseolus vulgaris
Phvul.002G185400 1.0kb downstream 1.0kb downstream 2909 true Chr02: 34761842-34764750 Phaseolus vulgaris
Phvul.002G185400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 34761842-34762841 Phaseolus vulgaris
Phvul.002G185400 2.0kb upstream 2.0kb upstream 3909 true Chr02: 34762842-34766750 Phaseolus vulgaris
Phvul.002G185400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 34764751-34766750 Phaseolus vulgaris
Phvul.002G185400 2.0kb downstream 2.0kb downstream 3909 true Chr02: 34760842-34764750 Phaseolus vulgaris
Phvul.002G185400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 34760842-34762841 Phaseolus vulgaris
Phvul.002G185400 5.0kb upstream 5.0kb upstream 6909 true Chr02: 34762842-34769750 Phaseolus vulgaris
Phvul.002G185400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 34764751-34769750 Phaseolus vulgaris
Phvul.002G185400 5.0kb downstream 5.0kb downstream 6909 true Chr02: 34757842-34764750 Phaseolus vulgaris
Phvul.002G185400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 34757842-34762841 Phaseolus vulgaris
Phvul.002G185400 10.0kb upstream 10.0kb upstream 11909 true Chr02: 34762842-34774750 Phaseolus vulgaris
Phvul.002G185400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 34764751-34774750 Phaseolus vulgaris
Phvul.002G185400 10.0kb downstream 10.0kb downstream 11909 true Chr02: 34752842-34764750 Phaseolus vulgaris
Phvul.002G185400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 34752842-34762841 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308863 5265 Fabidae View MSA
124069891 5270 Rosid View MSA
123747205 5271 Pentapetalae View MSA
122796968 5272 Eudicot View MSA
122050817 5273 Angiosperm View MSA
121348278 5274 Embryophyte View MSA
123380804 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.02051 0.0 6.77244    
cufflinks 5.76374 0.0 17.1271    
cufflinks 1.07585 0.0 3.84901    
cufflinks 1.62079 0.0 5.57736    
cufflinks 3.54334 0.0 11.2213    
cufflinks 3.24871 0.0 10.301    
cufflinks 4.78172 0.0 14.409    
cufflinks 4.08605 0.0 12.5409    
cufflinks 1.34563 0.0 4.68097    
cufflinks 0.0323991 0.0 0.159923 Low Low
cufflinks 3.95116 0.0 12.31    

0 Strain