Gene : Phvul.002G186000 P. vulgaris v2.1
Defline:  (1 of 3) PTHR11999//PTHR11999:SF105 - GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE // SUBFAMILY NOT NAMED Genomic Order:  1839
Name:  ? Phvul.002G186000 Secondary Identifier:  ? PAC:37175417
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY0-1305 Phaseolus vulgaris pathologic  
Pvulgaris PWY-4321 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G186000 0.5kb upstream 0.5kb upstream 2317 true Chr02: 34836379-34838695 Phaseolus vulgaris
Phvul.002G186000 0.5kb upstream 0.5kb upstream 500 false Chr02: 34836379-34836878 Phaseolus vulgaris
Phvul.002G186000 0.5kb downstream 0.5kb downstream 2317 true Chr02: 34836879-34839195 Phaseolus vulgaris
Phvul.002G186000 0.5kb downstream 0.5kb downstream 500 false Chr02: 34838696-34839195 Phaseolus vulgaris
Phvul.002G186000 1.0kb upstream 1.0kb upstream 2817 true Chr02: 34835879-34838695 Phaseolus vulgaris
Phvul.002G186000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 34835879-34836878 Phaseolus vulgaris
Phvul.002G186000 1.0kb downstream 1.0kb downstream 2817 true Chr02: 34836879-34839695 Phaseolus vulgaris
Phvul.002G186000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 34838696-34839695 Phaseolus vulgaris
Phvul.002G186000 2.0kb upstream 2.0kb upstream 3817 true Chr02: 34834879-34838695 Phaseolus vulgaris
Phvul.002G186000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 34834879-34836878 Phaseolus vulgaris
Phvul.002G186000 2.0kb downstream 2.0kb downstream 3817 true Chr02: 34836879-34840695 Phaseolus vulgaris
Phvul.002G186000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 34838696-34840695 Phaseolus vulgaris
Phvul.002G186000 5.0kb upstream 5.0kb upstream 6817 true Chr02: 34831879-34838695 Phaseolus vulgaris
Phvul.002G186000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 34831879-34836878 Phaseolus vulgaris
Phvul.002G186000 5.0kb downstream 5.0kb downstream 6817 true Chr02: 34836879-34843695 Phaseolus vulgaris
Phvul.002G186000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 34838696-34843695 Phaseolus vulgaris
Phvul.002G186000 10.0kb upstream 10.0kb upstream 11817 true Chr02: 34826879-34838695 Phaseolus vulgaris
Phvul.002G186000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 34826879-34836878 Phaseolus vulgaris
Phvul.002G186000 10.0kb downstream 10.0kb downstream 11817 true Chr02: 34836879-34848695 Phaseolus vulgaris
Phvul.002G186000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 34838696-34848695 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315687 5265 Fabidae View MSA
124038575 5270 Rosid View MSA
123743649 5271 Pentapetalae View MSA
122770727 5272 Eudicot View MSA
122049942 5273 Angiosperm View MSA
123429259 5275 Viridiplantae View MSA
121311658 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0210223 0.0 0.104186 Low  
cufflinks 0.0190422 0.0 0.0951085 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00251866 0.0 0.0187178 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0262093 0.0 0.126368 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain