Gene : Phvul.002G186200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31142:SF3 - PROTEIN TOM THREE HOMOLOG 1-RELATED Genomic Order:  1841
Name:  ? Phvul.002G186200 Secondary Identifier:  ? PAC:37174393
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G186200 0.5kb upstream 0.5kb upstream 6727 true Chr02: 34857850-34864576 Phaseolus vulgaris
Phvul.002G186200 0.5kb upstream 0.5kb upstream 500 false Chr02: 34857850-34858349 Phaseolus vulgaris
Phvul.002G186200 0.5kb downstream 0.5kb downstream 6727 true Chr02: 34858350-34865076 Phaseolus vulgaris
Phvul.002G186200 0.5kb downstream 0.5kb downstream 500 false Chr02: 34864577-34865076 Phaseolus vulgaris
Phvul.002G186200 1.0kb upstream 1.0kb upstream 7227 true Chr02: 34857350-34864576 Phaseolus vulgaris
Phvul.002G186200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 34857350-34858349 Phaseolus vulgaris
Phvul.002G186200 1.0kb downstream 1.0kb downstream 7227 true Chr02: 34858350-34865576 Phaseolus vulgaris
Phvul.002G186200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 34864577-34865576 Phaseolus vulgaris
Phvul.002G186200 2.0kb upstream 2.0kb upstream 8227 true Chr02: 34856350-34864576 Phaseolus vulgaris
Phvul.002G186200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 34856350-34858349 Phaseolus vulgaris
Phvul.002G186200 2.0kb downstream 2.0kb downstream 8227 true Chr02: 34858350-34866576 Phaseolus vulgaris
Phvul.002G186200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 34864577-34866576 Phaseolus vulgaris
Phvul.002G186200 5.0kb upstream 5.0kb upstream 11227 true Chr02: 34853350-34864576 Phaseolus vulgaris
Phvul.002G186200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 34853350-34858349 Phaseolus vulgaris
Phvul.002G186200 5.0kb downstream 5.0kb downstream 11227 true Chr02: 34858350-34869576 Phaseolus vulgaris
Phvul.002G186200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 34864577-34869576 Phaseolus vulgaris
Phvul.002G186200 10.0kb upstream 10.0kb upstream 16227 true Chr02: 34848350-34864576 Phaseolus vulgaris
Phvul.002G186200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 34848350-34858349 Phaseolus vulgaris
Phvul.002G186200 10.0kb downstream 10.0kb downstream 16227 true Chr02: 34858350-34874576 Phaseolus vulgaris
Phvul.002G186200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 34864577-34874576 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311267 5265 Fabidae View MSA
124070535 5270 Rosid View MSA
123753465 5271 Pentapetalae View MSA
122796045 5272 Eudicot View MSA
122049721 5273 Angiosperm View MSA
121345693 5274 Embryophyte View MSA
123426001 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 52.3577 0.0 136.056 High  
cufflinks 37.9776 0.0 98.165 High  
cufflinks 27.2906 0.0 70.8706    
cufflinks 47.329 0.0 122.545 High  
cufflinks 49.4391 0.0 128.136 High  
cufflinks 22.851 0.0 59.7769   Low
cufflinks 27.6034 0.0 71.6964 High  
cufflinks 28.1425 0.0 72.9723 High  
cufflinks 48.2505 0.0 124.926 High  
cufflinks 75.3477 0.0 199.265 High High
cufflinks 34.9714 0.0 90.4449 High  

0 Strain