Gene : Phvul.002G187600 P. vulgaris v2.1
Genomic Order:  1854 Name:  ? Phvul.002G187600
Secondary Identifier:  ? PAC:37175068
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G187600 0.5kb upstream 0.5kb upstream 3670 true Chr02: 35003161-35006830 Phaseolus vulgaris
Phvul.002G187600 0.5kb upstream 0.5kb upstream 500 false Chr02: 35003161-35003660 Phaseolus vulgaris
Phvul.002G187600 0.5kb downstream 0.5kb downstream 3670 true Chr02: 35003661-35007330 Phaseolus vulgaris
Phvul.002G187600 0.5kb downstream 0.5kb downstream 500 false Chr02: 35006831-35007330 Phaseolus vulgaris
Phvul.002G187600 1.0kb upstream 1.0kb upstream 4170 true Chr02: 35002661-35006830 Phaseolus vulgaris
Phvul.002G187600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 35002661-35003660 Phaseolus vulgaris
Phvul.002G187600 1.0kb downstream 1.0kb downstream 4170 true Chr02: 35003661-35007830 Phaseolus vulgaris
Phvul.002G187600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 35006831-35007830 Phaseolus vulgaris
Phvul.002G187600 2.0kb upstream 2.0kb upstream 5170 true Chr02: 35001661-35006830 Phaseolus vulgaris
Phvul.002G187600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 35001661-35003660 Phaseolus vulgaris
Phvul.002G187600 2.0kb downstream 2.0kb downstream 5170 true Chr02: 35003661-35008830 Phaseolus vulgaris
Phvul.002G187600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 35006831-35008830 Phaseolus vulgaris
Phvul.002G187600 5.0kb upstream 5.0kb upstream 8170 true Chr02: 34998661-35006830 Phaseolus vulgaris
Phvul.002G187600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 34998661-35003660 Phaseolus vulgaris
Phvul.002G187600 5.0kb downstream 5.0kb downstream 8170 true Chr02: 35003661-35011830 Phaseolus vulgaris
Phvul.002G187600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 35006831-35011830 Phaseolus vulgaris
Phvul.002G187600 10.0kb upstream 10.0kb upstream 13170 true Chr02: 34993661-35006830 Phaseolus vulgaris
Phvul.002G187600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 34993661-35003660 Phaseolus vulgaris
Phvul.002G187600 10.0kb downstream 10.0kb downstream 13170 true Chr02: 35003661-35016830 Phaseolus vulgaris
Phvul.002G187600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 35006831-35016830 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299895 5265 Fabidae View MSA
124063580 5270 Rosid View MSA
123736982 5271 Pentapetalae View MSA
122790366 5272 Eudicot View MSA
122049403 5273 Angiosperm View MSA
121349103 5274 Embryophyte View MSA
123381168 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.8183 0.0 56.2968    
cufflinks 24.6968 0.0 65.8273    
cufflinks 12.2066 0.0 34.4839   Low
cufflinks 25.9415 0.0 69.3726   High
cufflinks 19.2959 0.0 52.843    
cufflinks 9.56421 0.0 27.7336   Low
cufflinks 17.7836 0.0 48.58    
cufflinks 23.4087 0.0 62.362    
cufflinks 20.4133 0.0 55.1819    
cufflinks 18.5327 0.0 50.6796    
cufflinks 20.5091 0.0 55.5944    

0 Strain