Gene : Phvul.002G303200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10390 - HOMEOBOX PROTEIN SIX Genomic Order:  3021
Name:  ? Phvul.002G303200 Secondary Identifier:  ? PAC:37176434
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G303200 0.5kb upstream 0.5kb upstream 10503 true Chr02: 47137520-47148022 Phaseolus vulgaris
Phvul.002G303200 0.5kb upstream 0.5kb upstream 500 false Chr02: 47137520-47138019 Phaseolus vulgaris
Phvul.002G303200 0.5kb downstream 0.5kb downstream 10503 true Chr02: 47138020-47148522 Phaseolus vulgaris
Phvul.002G303200 0.5kb downstream 0.5kb downstream 500 false Chr02: 47148023-47148522 Phaseolus vulgaris
Phvul.002G303200 1.0kb upstream 1.0kb upstream 11003 true Chr02: 47137020-47148022 Phaseolus vulgaris
Phvul.002G303200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 47137020-47138019 Phaseolus vulgaris
Phvul.002G303200 1.0kb downstream 1.0kb downstream 11003 true Chr02: 47138020-47149022 Phaseolus vulgaris
Phvul.002G303200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 47148023-47149022 Phaseolus vulgaris
Phvul.002G303200 2.0kb upstream 2.0kb upstream 12003 true Chr02: 47136020-47148022 Phaseolus vulgaris
Phvul.002G303200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 47136020-47138019 Phaseolus vulgaris
Phvul.002G303200 2.0kb downstream 2.0kb downstream 12003 true Chr02: 47138020-47150022 Phaseolus vulgaris
Phvul.002G303200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 47148023-47150022 Phaseolus vulgaris
Phvul.002G303200 5.0kb upstream 5.0kb upstream 15003 true Chr02: 47133020-47148022 Phaseolus vulgaris
Phvul.002G303200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 47133020-47138019 Phaseolus vulgaris
Phvul.002G303200 5.0kb downstream 5.0kb downstream 15003 true Chr02: 47138020-47153022 Phaseolus vulgaris
Phvul.002G303200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 47148023-47153022 Phaseolus vulgaris
Phvul.002G303200 10.0kb upstream 10.0kb upstream 20003 true Chr02: 47128020-47148022 Phaseolus vulgaris
Phvul.002G303200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 47128020-47138019 Phaseolus vulgaris
Phvul.002G303200 10.0kb downstream 10.0kb downstream 20003 true Chr02: 47138020-47158022 Phaseolus vulgaris
Phvul.002G303200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 47148023-47158022 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306429 5265 Fabidae View MSA
124073562 5270 Rosid View MSA
123738423 5271 Pentapetalae View MSA
122790469 5272 Eudicot View MSA
122046337 5273 Angiosperm View MSA
121310590 5274 Embryophyte View MSA
123427491 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.79166 0.0 5.27044   Low
cufflinks 5.56759 0.0 14.7955    
cufflinks 7.96897 0.0 20.7261   High
cufflinks 1.23702 0.0 3.8407   Low
cufflinks 3.82409 0.0 10.5375    
cufflinks 3.61492 0.0 9.93896    
cufflinks 5.15287 0.0 13.7685    
cufflinks 6.18078 0.0 16.264    
cufflinks 4.70051 0.0 12.6776    
cufflinks 7.29868 0.0 19.093   High
cufflinks 2.58477 0.0 7.37122    

0 Strain