Gene : Phvul.002G304800 P. vulgaris v2.1
Defline:  (1 of 4) PTHR11034:SF23 - N-MYC DOWNREGULATED-LIKE 3 PROTEIN Genomic Order:  3037
Name:  ? Phvul.002G304800 Secondary Identifier:  ? PAC:37175857
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G304800 0.5kb upstream 0.5kb upstream 4346 true Chr02: 47299304-47303649 Phaseolus vulgaris
Phvul.002G304800 0.5kb upstream 0.5kb upstream 500 false Chr02: 47299304-47299803 Phaseolus vulgaris
Phvul.002G304800 0.5kb downstream 0.5kb downstream 4346 true Chr02: 47299804-47304149 Phaseolus vulgaris
Phvul.002G304800 0.5kb downstream 0.5kb downstream 500 false Chr02: 47303650-47304149 Phaseolus vulgaris
Phvul.002G304800 1.0kb upstream 1.0kb upstream 4846 true Chr02: 47298804-47303649 Phaseolus vulgaris
Phvul.002G304800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 47298804-47299803 Phaseolus vulgaris
Phvul.002G304800 1.0kb downstream 1.0kb downstream 4846 true Chr02: 47299804-47304649 Phaseolus vulgaris
Phvul.002G304800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 47303650-47304649 Phaseolus vulgaris
Phvul.002G304800 2.0kb upstream 2.0kb upstream 5846 true Chr02: 47297804-47303649 Phaseolus vulgaris
Phvul.002G304800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 47297804-47299803 Phaseolus vulgaris
Phvul.002G304800 2.0kb downstream 2.0kb downstream 5846 true Chr02: 47299804-47305649 Phaseolus vulgaris
Phvul.002G304800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 47303650-47305649 Phaseolus vulgaris
Phvul.002G304800 5.0kb upstream 5.0kb upstream 8846 true Chr02: 47294804-47303649 Phaseolus vulgaris
Phvul.002G304800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 47294804-47299803 Phaseolus vulgaris
Phvul.002G304800 5.0kb downstream 5.0kb downstream 8846 true Chr02: 47299804-47308649 Phaseolus vulgaris
Phvul.002G304800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 47303650-47308649 Phaseolus vulgaris
Phvul.002G304800 10.0kb upstream 10.0kb upstream 13846 true Chr02: 47289804-47303649 Phaseolus vulgaris
Phvul.002G304800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 47289804-47299803 Phaseolus vulgaris
Phvul.002G304800 10.0kb downstream 10.0kb downstream 13846 true Chr02: 47299804-47313649 Phaseolus vulgaris
Phvul.002G304800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 47303650-47313649 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299101 5265 Fabidae View MSA
124071063 5270 Rosid View MSA
123743242 5271 Pentapetalae View MSA
122795895 5272 Eudicot View MSA
122051433 5273 Angiosperm View MSA
121349062 5274 Embryophyte View MSA
123381146 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.57102 0.0 11.5629   Low
cufflinks 3.97862 0.0 12.5903   Low
cufflinks 6.15141 0.0 21.8133    
cufflinks 7.29939 0.0 25.7414    
cufflinks 8.05741 0.0 27.3975    
cufflinks 6.23647 0.0 26.2099    
cufflinks 13.176 0.0 47.3308   High
cufflinks 9.31493 0.0 34.9372    
cufflinks 13.3283 0.0 48.1473   High
cufflinks 7.48595 0.0 29.6863    
cufflinks 11.0491 0.0 41.8865    

0 Strain