Gene : Phvul.002G306600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31513:SF1 - GLYCINE-RICH PROTEIN Genomic Order:  3055
Name:  ? Phvul.002G306600 Secondary Identifier:  ? PAC:37176985
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G306600 0.5kb upstream 0.5kb upstream 12086 true Chr02: 47452630-47464715 Phaseolus vulgaris
Phvul.002G306600 0.5kb upstream 0.5kb upstream 500 false Chr02: 47452630-47453129 Phaseolus vulgaris
Phvul.002G306600 0.5kb downstream 0.5kb downstream 12086 true Chr02: 47453130-47465215 Phaseolus vulgaris
Phvul.002G306600 0.5kb downstream 0.5kb downstream 500 false Chr02: 47464716-47465215 Phaseolus vulgaris
Phvul.002G306600 1.0kb upstream 1.0kb upstream 12586 true Chr02: 47452130-47464715 Phaseolus vulgaris
Phvul.002G306600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 47452130-47453129 Phaseolus vulgaris
Phvul.002G306600 1.0kb downstream 1.0kb downstream 12586 true Chr02: 47453130-47465715 Phaseolus vulgaris
Phvul.002G306600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 47464716-47465715 Phaseolus vulgaris
Phvul.002G306600 2.0kb upstream 2.0kb upstream 13586 true Chr02: 47451130-47464715 Phaseolus vulgaris
Phvul.002G306600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 47451130-47453129 Phaseolus vulgaris
Phvul.002G306600 2.0kb downstream 2.0kb downstream 13586 true Chr02: 47453130-47466715 Phaseolus vulgaris
Phvul.002G306600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 47464716-47466715 Phaseolus vulgaris
Phvul.002G306600 5.0kb upstream 5.0kb upstream 16586 true Chr02: 47448130-47464715 Phaseolus vulgaris
Phvul.002G306600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 47448130-47453129 Phaseolus vulgaris
Phvul.002G306600 5.0kb downstream 5.0kb downstream 16586 true Chr02: 47453130-47469715 Phaseolus vulgaris
Phvul.002G306600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 47464716-47469715 Phaseolus vulgaris
Phvul.002G306600 10.0kb upstream 10.0kb upstream 21586 true Chr02: 47443130-47464715 Phaseolus vulgaris
Phvul.002G306600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 47443130-47453129 Phaseolus vulgaris
Phvul.002G306600 10.0kb downstream 10.0kb downstream 21586 true Chr02: 47453130-47474715 Phaseolus vulgaris
Phvul.002G306600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 47464716-47474715 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305302 5265 Fabidae View MSA
124073287 5270 Rosid View MSA
123741641 5271 Pentapetalae View MSA
122787770 5272 Eudicot View MSA
122043442 5273 Angiosperm View MSA
121344544 5274 Embryophyte View MSA
123380062 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.90547 0.0 15.2989   Low
cufflinks 5.62816 0.0 14.6067   Low
cufflinks 6.58652 0.0 17.0444    
cufflinks 8.08575 0.0 20.901    
cufflinks 11.8716 0.0 30.9557    
cufflinks 6.57296 0.0 17.0075    
cufflinks 11.078 0.0 28.8403    
cufflinks 11.3074 0.0 29.4643    
cufflinks 11.7034 0.0 30.47    
cufflinks 14.532 0.0 38.3277   High
cufflinks 7.46169 0.0 19.2872    

0 Strain