Gene : Phvul.002G306900 P. vulgaris v2.1

Defline:  (1 of 3) 3.4.24.64 - Mitochondrial processing peptidase / Processing enhancing peptidase Genomic Order:  3058
Name:  ? Phvul.002G306900 Secondary Identifier:  ? PAC:37175714

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-3781 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7279 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G306900 0.5kb upstream 0.5kb upstream 6703 true Chr02: 47480198-47486900 Phaseolus vulgaris
Phvul.002G306900 0.5kb upstream 0.5kb upstream 500 false Chr02: 47480198-47480697 Phaseolus vulgaris
Phvul.002G306900 0.5kb downstream 0.5kb downstream 6703 true Chr02: 47480698-47487400 Phaseolus vulgaris
Phvul.002G306900 0.5kb downstream 0.5kb downstream 500 false Chr02: 47486901-47487400 Phaseolus vulgaris
Phvul.002G306900 1.0kb upstream 1.0kb upstream 7203 true Chr02: 47479698-47486900 Phaseolus vulgaris
Phvul.002G306900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 47479698-47480697 Phaseolus vulgaris
Phvul.002G306900 1.0kb downstream 1.0kb downstream 7203 true Chr02: 47480698-47487900 Phaseolus vulgaris
Phvul.002G306900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 47486901-47487900 Phaseolus vulgaris
Phvul.002G306900 2.0kb upstream 2.0kb upstream 8203 true Chr02: 47478698-47486900 Phaseolus vulgaris
Phvul.002G306900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 47478698-47480697 Phaseolus vulgaris
Phvul.002G306900 2.0kb downstream 2.0kb downstream 8203 true Chr02: 47480698-47488900 Phaseolus vulgaris
Phvul.002G306900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 47486901-47488900 Phaseolus vulgaris
Phvul.002G306900 5.0kb upstream 5.0kb upstream 11203 true Chr02: 47475698-47486900 Phaseolus vulgaris
Phvul.002G306900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 47475698-47480697 Phaseolus vulgaris
Phvul.002G306900 5.0kb downstream 5.0kb downstream 11203 true Chr02: 47480698-47491900 Phaseolus vulgaris
Phvul.002G306900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 47486901-47491900 Phaseolus vulgaris
Phvul.002G306900 10.0kb upstream 10.0kb upstream 16203 true Chr02: 47470698-47486900 Phaseolus vulgaris
Phvul.002G306900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 47470698-47480697 Phaseolus vulgaris
Phvul.002G306900 10.0kb downstream 10.0kb downstream 16203 true Chr02: 47480698-47496900 Phaseolus vulgaris
Phvul.002G306900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 47486901-47496900 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041394 5273 Angiosperm View MSA
122308528 5265 Fabidae View MSA
124064083 5270 Rosid View MSA
123738249 5271 Pentapetalae View MSA
122789346 5272 Eudicot View MSA
121350423 5274 Embryophyte View MSA
123425006 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.2126 0.0 118.658 High  
cufflinks 39.6444 0.0 103.373 High  
cufflinks 29.0907 0.0 75.2649   Low
cufflinks 69.9478 0.0 188.557 High High
cufflinks 35.4878 0.0 92.0411 High  
cufflinks 27.615 0.0 71.3987   Low
cufflinks 36.6597 0.0 95.2944 High  
cufflinks 47.3819 0.0 124.916 High  
cufflinks 53.4876 0.0 141.374 High High
cufflinks 37.0282 0.0 96.2746 High  
cufflinks 37.6264 0.0 97.7512 High  

0 Strain