Gene : Phvul.002G308700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12726 - CERAMIDE GLUCOSYLTRANSFERASE Genomic Order:  3076
Name:  ? Phvul.002G308700 Secondary Identifier:  ? PAC:37176097
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G308700 0.5kb upstream 0.5kb upstream 6926 true Chr02: 47635144-47642069 Phaseolus vulgaris
Phvul.002G308700 0.5kb upstream 0.5kb upstream 500 false Chr02: 47635144-47635643 Phaseolus vulgaris
Phvul.002G308700 0.5kb downstream 0.5kb downstream 6926 true Chr02: 47635644-47642569 Phaseolus vulgaris
Phvul.002G308700 0.5kb downstream 0.5kb downstream 500 false Chr02: 47642070-47642569 Phaseolus vulgaris
Phvul.002G308700 1.0kb upstream 1.0kb upstream 7426 true Chr02: 47634644-47642069 Phaseolus vulgaris
Phvul.002G308700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 47634644-47635643 Phaseolus vulgaris
Phvul.002G308700 1.0kb downstream 1.0kb downstream 7426 true Chr02: 47635644-47643069 Phaseolus vulgaris
Phvul.002G308700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 47642070-47643069 Phaseolus vulgaris
Phvul.002G308700 2.0kb upstream 2.0kb upstream 8426 true Chr02: 47633644-47642069 Phaseolus vulgaris
Phvul.002G308700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 47633644-47635643 Phaseolus vulgaris
Phvul.002G308700 2.0kb downstream 2.0kb downstream 8426 true Chr02: 47635644-47644069 Phaseolus vulgaris
Phvul.002G308700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 47642070-47644069 Phaseolus vulgaris
Phvul.002G308700 5.0kb upstream 5.0kb upstream 11426 true Chr02: 47630644-47642069 Phaseolus vulgaris
Phvul.002G308700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 47630644-47635643 Phaseolus vulgaris
Phvul.002G308700 5.0kb downstream 5.0kb downstream 11426 true Chr02: 47635644-47647069 Phaseolus vulgaris
Phvul.002G308700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 47642070-47647069 Phaseolus vulgaris
Phvul.002G308700 10.0kb upstream 10.0kb upstream 16426 true Chr02: 47625644-47642069 Phaseolus vulgaris
Phvul.002G308700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 47625644-47635643 Phaseolus vulgaris
Phvul.002G308700 10.0kb downstream 10.0kb downstream 16426 true Chr02: 47635644-47652069 Phaseolus vulgaris
Phvul.002G308700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 47642070-47652069 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308566 5265 Fabidae View MSA
124067627 5270 Rosid View MSA
123748173 5271 Pentapetalae View MSA
122788226 5272 Eudicot View MSA
122045513 5273 Angiosperm View MSA
121350192 5274 Embryophyte View MSA
123426022 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.94034 0.0 11.4421   Low
cufflinks 5.63802 0.0 15.8377    
cufflinks 26.8867 0.0 69.5847   High
cufflinks 21.7769 0.0 56.3614   High
cufflinks 7.01007 0.0 19.4246    
cufflinks 14.8801 0.0 38.833    
cufflinks 8.04078 0.0 21.9373    
cufflinks 18.6304 0.0 48.2432    
cufflinks 9.80633 0.0 26.3954    
cufflinks 2.12373 0.0 6.64632   Low
cufflinks 7.9303 0.0 21.7265    

0 Strain