Gene : Phvul.002G294300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10794:SF58 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN Genomic Order:  2928
Name:  ? Phvul.002G294300 Secondary Identifier:  ? PAC:37175409
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G294300 0.5kb upstream 0.5kb upstream 6015 true Chr02: 46327965-46333979 Phaseolus vulgaris
Phvul.002G294300 0.5kb upstream 0.5kb upstream 500 false Chr02: 46333480-46333979 Phaseolus vulgaris
Phvul.002G294300 0.5kb downstream 0.5kb downstream 6015 true Chr02: 46327465-46333479 Phaseolus vulgaris
Phvul.002G294300 0.5kb downstream 0.5kb downstream 500 false Chr02: 46327465-46327964 Phaseolus vulgaris
Phvul.002G294300 1.0kb upstream 1.0kb upstream 6515 true Chr02: 46327965-46334479 Phaseolus vulgaris
Phvul.002G294300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46333480-46334479 Phaseolus vulgaris
Phvul.002G294300 1.0kb downstream 1.0kb downstream 6515 true Chr02: 46326965-46333479 Phaseolus vulgaris
Phvul.002G294300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46326965-46327964 Phaseolus vulgaris
Phvul.002G294300 2.0kb upstream 2.0kb upstream 7515 true Chr02: 46327965-46335479 Phaseolus vulgaris
Phvul.002G294300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46333480-46335479 Phaseolus vulgaris
Phvul.002G294300 2.0kb downstream 2.0kb downstream 7515 true Chr02: 46325965-46333479 Phaseolus vulgaris
Phvul.002G294300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46325965-46327964 Phaseolus vulgaris
Phvul.002G294300 5.0kb upstream 5.0kb upstream 10515 true Chr02: 46327965-46338479 Phaseolus vulgaris
Phvul.002G294300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46333480-46338479 Phaseolus vulgaris
Phvul.002G294300 5.0kb downstream 5.0kb downstream 10515 true Chr02: 46322965-46333479 Phaseolus vulgaris
Phvul.002G294300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46322965-46327964 Phaseolus vulgaris
Phvul.002G294300 10.0kb upstream 10.0kb upstream 15515 true Chr02: 46327965-46343479 Phaseolus vulgaris
Phvul.002G294300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46333480-46343479 Phaseolus vulgaris
Phvul.002G294300 10.0kb downstream 10.0kb downstream 15515 true Chr02: 46317965-46333479 Phaseolus vulgaris
Phvul.002G294300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46317965-46327964 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307790 5265 Fabidae View MSA
124068174 5270 Rosid View MSA
123739909 5271 Pentapetalae View MSA
122789492 5272 Eudicot View MSA
122042662 5273 Angiosperm View MSA
121345279 5274 Embryophyte View MSA
123428279 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.2865 0.0 58.0514   High
cufflinks 17.8772 0.0 47.1987    
cufflinks 16.6227 0.0 43.9304    
cufflinks 21.1092 0.0 55.2802   High
cufflinks 14.5378 0.0 38.9181    
cufflinks 17.6303 0.0 46.5403    
cufflinks 9.49878 0.0 26.4308   Low
cufflinks 9.72092 0.0 26.8632   Low
cufflinks 10.8352 0.0 29.8821   Low
cufflinks 16.7751 0.0 44.4612    
cufflinks 17.7863 0.0 47.095    

0 Strain