Gene : Phvul.002G294500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24349:SF95 - CALCIUM-DEPENDENT PROTEIN KINASE 3 Genomic Order:  2930
Name:  ? Phvul.002G294500 Secondary Identifier:  ? PAC:37178761
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G294500 0.5kb upstream 0.5kb upstream 9292 true Chr02: 46343903-46353194 Phaseolus vulgaris
Phvul.002G294500 0.5kb upstream 0.5kb upstream 500 false Chr02: 46352695-46353194 Phaseolus vulgaris
Phvul.002G294500 0.5kb downstream 0.5kb downstream 9292 true Chr02: 46343403-46352694 Phaseolus vulgaris
Phvul.002G294500 0.5kb downstream 0.5kb downstream 500 false Chr02: 46343403-46343902 Phaseolus vulgaris
Phvul.002G294500 1.0kb upstream 1.0kb upstream 9792 true Chr02: 46343903-46353694 Phaseolus vulgaris
Phvul.002G294500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46352695-46353694 Phaseolus vulgaris
Phvul.002G294500 1.0kb downstream 1.0kb downstream 9792 true Chr02: 46342903-46352694 Phaseolus vulgaris
Phvul.002G294500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46342903-46343902 Phaseolus vulgaris
Phvul.002G294500 2.0kb upstream 2.0kb upstream 10792 true Chr02: 46343903-46354694 Phaseolus vulgaris
Phvul.002G294500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46352695-46354694 Phaseolus vulgaris
Phvul.002G294500 2.0kb downstream 2.0kb downstream 10792 true Chr02: 46341903-46352694 Phaseolus vulgaris
Phvul.002G294500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46341903-46343902 Phaseolus vulgaris
Phvul.002G294500 5.0kb upstream 5.0kb upstream 13792 true Chr02: 46343903-46357694 Phaseolus vulgaris
Phvul.002G294500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46352695-46357694 Phaseolus vulgaris
Phvul.002G294500 5.0kb downstream 5.0kb downstream 13792 true Chr02: 46338903-46352694 Phaseolus vulgaris
Phvul.002G294500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46338903-46343902 Phaseolus vulgaris
Phvul.002G294500 10.0kb upstream 10.0kb upstream 18792 true Chr02: 46343903-46362694 Phaseolus vulgaris
Phvul.002G294500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46352695-46362694 Phaseolus vulgaris
Phvul.002G294500 10.0kb downstream 10.0kb downstream 18792 true Chr02: 46333903-46352694 Phaseolus vulgaris
Phvul.002G294500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46333903-46343902 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305907 5265 Fabidae View MSA
124061740 5270 Rosid View MSA
123741136 5271 Pentapetalae View MSA
122788703 5272 Eudicot View MSA
122043516 5273 Angiosperm View MSA
121349479 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.4312 0.0 19.9302   Low
cufflinks 16.9641 0.0 43.8693   High
cufflinks 10.5735 0.0 27.768    
cufflinks 9.35376 0.0 24.689    
cufflinks 9.33044 0.0 24.6845    
cufflinks 7.13739 0.0 19.2437   Low
cufflinks 9.75323 0.0 25.6703    
cufflinks 10.6083 0.0 27.8151    
cufflinks 13.8747 0.0 35.9866    
cufflinks 15.6475 0.0 40.4955   High
cufflinks 9.46548 0.0 24.9948    

0 Strain