Gene : Phvul.002G294900 P. vulgaris v2.1
Defline:  (1 of 2) PTHR21495//PTHR21495:SF70 - NUCLEOPORIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2934
Name:  ? Phvul.002G294900 Secondary Identifier:  ? PAC:37178833
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G294900 0.5kb upstream 0.5kb upstream 1172 true Chr02: 46395250-46396421 Phaseolus vulgaris
Phvul.002G294900 0.5kb upstream 0.5kb upstream 500 false Chr02: 46395922-46396421 Phaseolus vulgaris
Phvul.002G294900 0.5kb downstream 0.5kb downstream 1172 true Chr02: 46394750-46395921 Phaseolus vulgaris
Phvul.002G294900 0.5kb downstream 0.5kb downstream 500 false Chr02: 46394750-46395249 Phaseolus vulgaris
Phvul.002G294900 1.0kb upstream 1.0kb upstream 1672 true Chr02: 46395250-46396921 Phaseolus vulgaris
Phvul.002G294900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46395922-46396921 Phaseolus vulgaris
Phvul.002G294900 1.0kb downstream 1.0kb downstream 1672 true Chr02: 46394250-46395921 Phaseolus vulgaris
Phvul.002G294900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46394250-46395249 Phaseolus vulgaris
Phvul.002G294900 2.0kb upstream 2.0kb upstream 2672 true Chr02: 46395250-46397921 Phaseolus vulgaris
Phvul.002G294900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46395922-46397921 Phaseolus vulgaris
Phvul.002G294900 2.0kb downstream 2.0kb downstream 2672 true Chr02: 46393250-46395921 Phaseolus vulgaris
Phvul.002G294900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46393250-46395249 Phaseolus vulgaris
Phvul.002G294900 5.0kb upstream 5.0kb upstream 5672 true Chr02: 46395250-46400921 Phaseolus vulgaris
Phvul.002G294900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46395922-46400921 Phaseolus vulgaris
Phvul.002G294900 5.0kb downstream 5.0kb downstream 5672 true Chr02: 46390250-46395921 Phaseolus vulgaris
Phvul.002G294900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46390250-46395249 Phaseolus vulgaris
Phvul.002G294900 10.0kb upstream 10.0kb upstream 10672 true Chr02: 46395250-46405921 Phaseolus vulgaris
Phvul.002G294900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46395922-46405921 Phaseolus vulgaris
Phvul.002G294900 10.0kb downstream 10.0kb downstream 10672 true Chr02: 46385250-46395921 Phaseolus vulgaris
Phvul.002G294900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46385250-46395249 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310154 5265 Fabidae View MSA
124071595 5270 Rosid View MSA
123748971 5271 Pentapetalae View MSA
122793994 5272 Eudicot View MSA
122050560 5273 Angiosperm View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.36785 0.0 5.15719    
cufflinks 1.4184 0.0 5.33652    
cufflinks 0.235471 0.0 1.0263 Low Low
cufflinks 0.740842 0.0 2.92827    
cufflinks 3.0344 0.0 10.6824    
cufflinks 0.707613 0.0 2.81118    
cufflinks 11.1323 0.0 33.6231   High
cufflinks 9.03082 0.0 27.9848   High
cufflinks 2.96179 0.0 10.3885    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.72995 0.0 9.71169    

0 Strain