Gene : Phvul.002G295600 P. vulgaris v2.1
Defline:  (1 of 41) PF00069//PF08263//PF13855 - Protein kinase domain (Pkinase) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) Genomic Order:  2941
Name:  ? Phvul.002G295600 Secondary Identifier:  ? PAC:37175763
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G295600 0.5kb upstream 0.5kb upstream 4865 true Chr02: 46469996-46474860 Phaseolus vulgaris
Phvul.002G295600 0.5kb upstream 0.5kb upstream 500 false Chr02: 46469996-46470495 Phaseolus vulgaris
Phvul.002G295600 0.5kb downstream 0.5kb downstream 4865 true Chr02: 46470496-46475360 Phaseolus vulgaris
Phvul.002G295600 0.5kb downstream 0.5kb downstream 500 false Chr02: 46474861-46475360 Phaseolus vulgaris
Phvul.002G295600 1.0kb upstream 1.0kb upstream 5365 true Chr02: 46469496-46474860 Phaseolus vulgaris
Phvul.002G295600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46469496-46470495 Phaseolus vulgaris
Phvul.002G295600 1.0kb downstream 1.0kb downstream 5365 true Chr02: 46470496-46475860 Phaseolus vulgaris
Phvul.002G295600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46474861-46475860 Phaseolus vulgaris
Phvul.002G295600 2.0kb upstream 2.0kb upstream 6365 true Chr02: 46468496-46474860 Phaseolus vulgaris
Phvul.002G295600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46468496-46470495 Phaseolus vulgaris
Phvul.002G295600 2.0kb downstream 2.0kb downstream 6365 true Chr02: 46470496-46476860 Phaseolus vulgaris
Phvul.002G295600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46474861-46476860 Phaseolus vulgaris
Phvul.002G295600 5.0kb upstream 5.0kb upstream 9365 true Chr02: 46465496-46474860 Phaseolus vulgaris
Phvul.002G295600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46465496-46470495 Phaseolus vulgaris
Phvul.002G295600 5.0kb downstream 5.0kb downstream 9365 true Chr02: 46470496-46479860 Phaseolus vulgaris
Phvul.002G295600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46474861-46479860 Phaseolus vulgaris
Phvul.002G295600 10.0kb upstream 10.0kb upstream 14365 true Chr02: 46460496-46474860 Phaseolus vulgaris
Phvul.002G295600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46460496-46470495 Phaseolus vulgaris
Phvul.002G295600 10.0kb downstream 10.0kb downstream 14365 true Chr02: 46470496-46484860 Phaseolus vulgaris
Phvul.002G295600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46474861-46484860 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026275 5273 Angiosperm View MSA
122302863 5265 Fabidae View MSA
124069725 5270 Rosid View MSA
123742624 5271 Pentapetalae View MSA
122793300 5272 Eudicot View MSA
121296256 5274 Embryophyte View MSA
123334452 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.60335 0.0 7.61066   Low
cufflinks 16.2669 0.0 42.0473    
cufflinks 34.5998 0.0 92.1778   High
cufflinks 10.9211 0.0 28.4974    
cufflinks 14.9373 0.0 38.6325    
cufflinks 26.2642 0.0 68.6798   High
cufflinks 4.86408 0.0 13.3679    
cufflinks 3.38353 0.0 9.59493   Low
cufflinks 6.76605 0.0 18.1313    
cufflinks 2.95101 0.0 8.51091   Low
cufflinks 13.1701 0.0 34.1219    

0 Strain