Gene : Phvul.002G293000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11751:SF380 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 2-RELATED Genomic Order:  2915
Name:  ? Phvul.002G293000 Secondary Identifier:  ? PAC:37177206
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ETHYL-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-7270 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G293000 0.5kb upstream 0.5kb upstream 3339 true Chr02: 46198013-46201351 Phaseolus vulgaris
Phvul.002G293000 0.5kb upstream 0.5kb upstream 500 false Chr02: 46200852-46201351 Phaseolus vulgaris
Phvul.002G293000 0.5kb downstream 0.5kb downstream 3339 true Chr02: 46197513-46200851 Phaseolus vulgaris
Phvul.002G293000 0.5kb downstream 0.5kb downstream 500 false Chr02: 46197513-46198012 Phaseolus vulgaris
Phvul.002G293000 1.0kb upstream 1.0kb upstream 3839 true Chr02: 46198013-46201851 Phaseolus vulgaris
Phvul.002G293000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46200852-46201851 Phaseolus vulgaris
Phvul.002G293000 1.0kb downstream 1.0kb downstream 3839 true Chr02: 46197013-46200851 Phaseolus vulgaris
Phvul.002G293000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46197013-46198012 Phaseolus vulgaris
Phvul.002G293000 2.0kb upstream 2.0kb upstream 4839 true Chr02: 46198013-46202851 Phaseolus vulgaris
Phvul.002G293000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46200852-46202851 Phaseolus vulgaris
Phvul.002G293000 2.0kb downstream 2.0kb downstream 4839 true Chr02: 46196013-46200851 Phaseolus vulgaris
Phvul.002G293000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46196013-46198012 Phaseolus vulgaris
Phvul.002G293000 5.0kb upstream 5.0kb upstream 7839 true Chr02: 46198013-46205851 Phaseolus vulgaris
Phvul.002G293000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46200852-46205851 Phaseolus vulgaris
Phvul.002G293000 5.0kb downstream 5.0kb downstream 7839 true Chr02: 46193013-46200851 Phaseolus vulgaris
Phvul.002G293000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46193013-46198012 Phaseolus vulgaris
Phvul.002G293000 10.0kb upstream 10.0kb upstream 12839 true Chr02: 46198013-46210851 Phaseolus vulgaris
Phvul.002G293000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46200852-46210851 Phaseolus vulgaris
Phvul.002G293000 10.0kb downstream 10.0kb downstream 12839 true Chr02: 46188013-46200851 Phaseolus vulgaris
Phvul.002G293000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46188013-46198012 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299768 5265 Fabidae View MSA
124064739 5270 Rosid View MSA
123742797 5271 Pentapetalae View MSA
122787155 5272 Eudicot View MSA
122050094 5273 Angiosperm View MSA
121311735 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.8933 0.0 102.103 High High
cufflinks 1.35747 0.0 4.43373    
cufflinks 1.23737 0.0 4.06491    
cufflinks 1.66737 0.0 5.35748    
cufflinks 0.918389 0.0 3.15145   Low
cufflinks 0.969537 0.0 3.28825    
cufflinks 22.5924 0.0 58.3976   High
cufflinks 10.684 0.0 28.2403    
cufflinks 12.8046 0.0 33.612    
cufflinks 7.14655 0.0 19.5569    
cufflinks 1.31433 0.0 4.32745    

0 Strain