Gene : Phvul.002G293400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11668:SF280 - SERINE/THREONINE-PROTEIN PHOSPHATASE PP1 ISOZYME 7 Genomic Order:  2919
Name:  ? Phvul.002G293400 Secondary Identifier:  ? PAC:37176120
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G293400 0.5kb upstream 0.5kb upstream 4677 true Chr02: 46238750-46243426 Phaseolus vulgaris
Phvul.002G293400 0.5kb upstream 0.5kb upstream 500 false Chr02: 46242927-46243426 Phaseolus vulgaris
Phvul.002G293400 0.5kb downstream 0.5kb downstream 4677 true Chr02: 46238250-46242926 Phaseolus vulgaris
Phvul.002G293400 0.5kb downstream 0.5kb downstream 500 false Chr02: 46238250-46238749 Phaseolus vulgaris
Phvul.002G293400 1.0kb upstream 1.0kb upstream 5177 true Chr02: 46238750-46243926 Phaseolus vulgaris
Phvul.002G293400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46242927-46243926 Phaseolus vulgaris
Phvul.002G293400 1.0kb downstream 1.0kb downstream 5177 true Chr02: 46237750-46242926 Phaseolus vulgaris
Phvul.002G293400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46237750-46238749 Phaseolus vulgaris
Phvul.002G293400 2.0kb upstream 2.0kb upstream 6177 true Chr02: 46238750-46244926 Phaseolus vulgaris
Phvul.002G293400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46242927-46244926 Phaseolus vulgaris
Phvul.002G293400 2.0kb downstream 2.0kb downstream 6177 true Chr02: 46236750-46242926 Phaseolus vulgaris
Phvul.002G293400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46236750-46238749 Phaseolus vulgaris
Phvul.002G293400 5.0kb upstream 5.0kb upstream 9177 true Chr02: 46238750-46247926 Phaseolus vulgaris
Phvul.002G293400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46242927-46247926 Phaseolus vulgaris
Phvul.002G293400 5.0kb downstream 5.0kb downstream 9177 true Chr02: 46233750-46242926 Phaseolus vulgaris
Phvul.002G293400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46233750-46238749 Phaseolus vulgaris
Phvul.002G293400 10.0kb upstream 10.0kb upstream 14177 true Chr02: 46238750-46252926 Phaseolus vulgaris
Phvul.002G293400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46242927-46252926 Phaseolus vulgaris
Phvul.002G293400 10.0kb downstream 10.0kb downstream 14177 true Chr02: 46228750-46242926 Phaseolus vulgaris
Phvul.002G293400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46228750-46238749 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305022 5265 Fabidae View MSA
124061068 5270 Rosid View MSA
123743597 5271 Pentapetalae View MSA
122792563 5272 Eudicot View MSA
122051465 5273 Angiosperm View MSA
121347945 5274 Embryophyte View MSA
123424446 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.8282 0.0 120.152 High  
cufflinks 37.8726 0.0 98.3169 High  
cufflinks 29.9819 0.0 77.5128   Low
cufflinks 57.6712 0.0 152.716 High High
cufflinks 41.4903 0.0 107.856 High  
cufflinks 27.9777 0.0 72.3175   Low
cufflinks 32.8621 0.0 85.0556 High  
cufflinks 33.5868 0.0 86.977 High  
cufflinks 40.3109 0.0 104.766 High  
cufflinks 38.5782 0.0 100.215 High  
cufflinks 37.8886 0.0 98.2548 High  

0 Strain