Gene : Phvul.002G296400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR32285:SF40 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 23-RELATED Genomic Order:  2950
Name:  ? Phvul.002G296400 Secondary Identifier:  ? PAC:37174525
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G296400 0.5kb upstream 0.5kb upstream 3750 true Chr02: 46529793-46533542 Phaseolus vulgaris
Phvul.002G296400 0.5kb upstream 0.5kb upstream 500 false Chr02: 46529793-46530292 Phaseolus vulgaris
Phvul.002G296400 0.5kb downstream 0.5kb downstream 3750 true Chr02: 46530293-46534042 Phaseolus vulgaris
Phvul.002G296400 0.5kb downstream 0.5kb downstream 500 false Chr02: 46533543-46534042 Phaseolus vulgaris
Phvul.002G296400 1.0kb upstream 1.0kb upstream 4250 true Chr02: 46529293-46533542 Phaseolus vulgaris
Phvul.002G296400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46529293-46530292 Phaseolus vulgaris
Phvul.002G296400 1.0kb downstream 1.0kb downstream 4250 true Chr02: 46530293-46534542 Phaseolus vulgaris
Phvul.002G296400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46533543-46534542 Phaseolus vulgaris
Phvul.002G296400 2.0kb upstream 2.0kb upstream 5250 true Chr02: 46528293-46533542 Phaseolus vulgaris
Phvul.002G296400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46528293-46530292 Phaseolus vulgaris
Phvul.002G296400 2.0kb downstream 2.0kb downstream 5250 true Chr02: 46530293-46535542 Phaseolus vulgaris
Phvul.002G296400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46533543-46535542 Phaseolus vulgaris
Phvul.002G296400 5.0kb upstream 5.0kb upstream 8250 true Chr02: 46525293-46533542 Phaseolus vulgaris
Phvul.002G296400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46525293-46530292 Phaseolus vulgaris
Phvul.002G296400 5.0kb downstream 5.0kb downstream 8250 true Chr02: 46530293-46538542 Phaseolus vulgaris
Phvul.002G296400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46533543-46538542 Phaseolus vulgaris
Phvul.002G296400 10.0kb upstream 10.0kb upstream 13250 true Chr02: 46520293-46533542 Phaseolus vulgaris
Phvul.002G296400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46520293-46530292 Phaseolus vulgaris
Phvul.002G296400 10.0kb downstream 10.0kb downstream 13250 true Chr02: 46530293-46543542 Phaseolus vulgaris
Phvul.002G296400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46533543-46543542 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302565 5265 Fabidae View MSA
124065212 5270 Rosid View MSA
123736639 5271 Pentapetalae View MSA
122792131 5272 Eudicot View MSA
122046585 5273 Angiosperm View MSA
121348167 5274 Embryophyte View MSA
123380754 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.00481 0.0 16.8652   Low
cufflinks 15.3871 0.0 40.2651    
cufflinks 16.1063 0.0 41.9991    
cufflinks 21.1845 0.0 54.8617   High
cufflinks 15.2204 0.0 39.9253    
cufflinks 17.6654 0.0 45.9399    
cufflinks 11.3917 0.0 30.3317    
cufflinks 8.17627 0.0 22.3139   Low
cufflinks 13.9648 0.0 36.7573    
cufflinks 11.3485 0.0 30.288    
cufflinks 21.5564 0.0 55.8418   High

0 Strain