Gene : Phvul.002G299500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR16684 - CENTROMERE PROTEIN C Genomic Order:  2981
Name:  ? Phvul.002G299500 Secondary Identifier:  ? PAC:37174518
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G299500 0.5kb upstream 0.5kb upstream 4022 true Chr02: 46739467-46743488 Phaseolus vulgaris
Phvul.002G299500 0.5kb upstream 0.5kb upstream 500 false Chr02: 46739467-46739966 Phaseolus vulgaris
Phvul.002G299500 0.5kb downstream 0.5kb downstream 4022 true Chr02: 46739967-46743988 Phaseolus vulgaris
Phvul.002G299500 0.5kb downstream 0.5kb downstream 500 false Chr02: 46743489-46743988 Phaseolus vulgaris
Phvul.002G299500 1.0kb upstream 1.0kb upstream 4522 true Chr02: 46738967-46743488 Phaseolus vulgaris
Phvul.002G299500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46738967-46739966 Phaseolus vulgaris
Phvul.002G299500 1.0kb downstream 1.0kb downstream 4522 true Chr02: 46739967-46744488 Phaseolus vulgaris
Phvul.002G299500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46743489-46744488 Phaseolus vulgaris
Phvul.002G299500 2.0kb upstream 2.0kb upstream 5522 true Chr02: 46737967-46743488 Phaseolus vulgaris
Phvul.002G299500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46737967-46739966 Phaseolus vulgaris
Phvul.002G299500 2.0kb downstream 2.0kb downstream 5522 true Chr02: 46739967-46745488 Phaseolus vulgaris
Phvul.002G299500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46743489-46745488 Phaseolus vulgaris
Phvul.002G299500 5.0kb upstream 5.0kb upstream 8522 true Chr02: 46734967-46743488 Phaseolus vulgaris
Phvul.002G299500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46734967-46739966 Phaseolus vulgaris
Phvul.002G299500 5.0kb downstream 5.0kb downstream 8522 true Chr02: 46739967-46748488 Phaseolus vulgaris
Phvul.002G299500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46743489-46748488 Phaseolus vulgaris
Phvul.002G299500 10.0kb upstream 10.0kb upstream 13522 true Chr02: 46729967-46743488 Phaseolus vulgaris
Phvul.002G299500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46729967-46739966 Phaseolus vulgaris
Phvul.002G299500 10.0kb downstream 10.0kb downstream 13522 true Chr02: 46739967-46753488 Phaseolus vulgaris
Phvul.002G299500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46743489-46753488 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312102 5265 Fabidae View MSA
124069711 5270 Rosid View MSA
123738687 5271 Pentapetalae View MSA
122788582 5272 Eudicot View MSA
122045185 5273 Angiosperm View MSA
121350045 5274 Embryophyte View MSA
123426660 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.30283 0.0 12.3365    
cufflinks 10.2784 0.0 27.3258   High
cufflinks 2.91457 0.0 8.72476   Low
cufflinks 2.96671 0.0 8.90785   Low
cufflinks 4.0182 0.0 11.683    
cufflinks 5.94785 0.0 16.5442    
cufflinks 6.54923 0.0 18.0184    
cufflinks 4.87144 0.0 13.7559    
cufflinks 5.41645 0.0 15.1707    
cufflinks 2.45021 0.0 7.497   Low
cufflinks 5.24081 0.0 14.7925    

0 Strain