Gene : Phvul.002G299400 P. vulgaris v2.1
Defline:  (1 of 3) PTHR23056:SF45 - CALCINEURIN B-LIKE PROTEIN 4 Genomic Order:  2980
Name:  ? Phvul.002G299400 Secondary Identifier:  ? PAC:37177762
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G299400 0.5kb upstream 0.5kb upstream 2465 true Chr02: 46731778-46734242 Phaseolus vulgaris
Phvul.002G299400 0.5kb upstream 0.5kb upstream 500 false Chr02: 46733743-46734242 Phaseolus vulgaris
Phvul.002G299400 0.5kb downstream 0.5kb downstream 2465 true Chr02: 46731278-46733742 Phaseolus vulgaris
Phvul.002G299400 0.5kb downstream 0.5kb downstream 500 false Chr02: 46731278-46731777 Phaseolus vulgaris
Phvul.002G299400 1.0kb upstream 1.0kb upstream 2965 true Chr02: 46731778-46734742 Phaseolus vulgaris
Phvul.002G299400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46733743-46734742 Phaseolus vulgaris
Phvul.002G299400 1.0kb downstream 1.0kb downstream 2965 true Chr02: 46730778-46733742 Phaseolus vulgaris
Phvul.002G299400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46730778-46731777 Phaseolus vulgaris
Phvul.002G299400 2.0kb upstream 2.0kb upstream 3965 true Chr02: 46731778-46735742 Phaseolus vulgaris
Phvul.002G299400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46733743-46735742 Phaseolus vulgaris
Phvul.002G299400 2.0kb downstream 2.0kb downstream 3965 true Chr02: 46729778-46733742 Phaseolus vulgaris
Phvul.002G299400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46729778-46731777 Phaseolus vulgaris
Phvul.002G299400 5.0kb upstream 5.0kb upstream 6965 true Chr02: 46731778-46738742 Phaseolus vulgaris
Phvul.002G299400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46733743-46738742 Phaseolus vulgaris
Phvul.002G299400 5.0kb downstream 5.0kb downstream 6965 true Chr02: 46726778-46733742 Phaseolus vulgaris
Phvul.002G299400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46726778-46731777 Phaseolus vulgaris
Phvul.002G299400 10.0kb upstream 10.0kb upstream 11965 true Chr02: 46731778-46743742 Phaseolus vulgaris
Phvul.002G299400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46733743-46743742 Phaseolus vulgaris
Phvul.002G299400 10.0kb downstream 10.0kb downstream 11965 true Chr02: 46721778-46733742 Phaseolus vulgaris
Phvul.002G299400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46721778-46731777 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311625 5265 Fabidae View MSA
124068931 5270 Rosid View MSA
123646895 5271 Pentapetalae View MSA
122680923 5272 Eudicot View MSA
122051597 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350709 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0612373 0.0 0.299911 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.136094 0.0 0.61494 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain