Gene : Phvul.002G289100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11588//PTHR11588:SF124 - TUBULIN // SUBFAMILY NOT NAMED Genomic Order:  2875
Name:  ? Phvul.002G289100 Secondary Identifier:  ? PAC:37177064
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5695 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6608 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6609 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7179 Phaseolus vulgaris pathologic  
Pvulgaris SALVADEHYPOX-PWY Phaseolus vulgaris pathologic  
Pvulgaris URSIN-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G289100 0.5kb upstream 0.5kb upstream 2987 true Chr02: 45787339-45790325 Phaseolus vulgaris
Phvul.002G289100 0.5kb upstream 0.5kb upstream 500 false Chr02: 45789826-45790325 Phaseolus vulgaris
Phvul.002G289100 0.5kb downstream 0.5kb downstream 2987 true Chr02: 45786839-45789825 Phaseolus vulgaris
Phvul.002G289100 0.5kb downstream 0.5kb downstream 500 false Chr02: 45786839-45787338 Phaseolus vulgaris
Phvul.002G289100 1.0kb upstream 1.0kb upstream 3487 true Chr02: 45787339-45790825 Phaseolus vulgaris
Phvul.002G289100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45789826-45790825 Phaseolus vulgaris
Phvul.002G289100 1.0kb downstream 1.0kb downstream 3487 true Chr02: 45786339-45789825 Phaseolus vulgaris
Phvul.002G289100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45786339-45787338 Phaseolus vulgaris
Phvul.002G289100 2.0kb upstream 2.0kb upstream 4487 true Chr02: 45787339-45791825 Phaseolus vulgaris
Phvul.002G289100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45789826-45791825 Phaseolus vulgaris
Phvul.002G289100 2.0kb downstream 2.0kb downstream 4487 true Chr02: 45785339-45789825 Phaseolus vulgaris
Phvul.002G289100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45785339-45787338 Phaseolus vulgaris
Phvul.002G289100 5.0kb upstream 5.0kb upstream 7487 true Chr02: 45787339-45794825 Phaseolus vulgaris
Phvul.002G289100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45789826-45794825 Phaseolus vulgaris
Phvul.002G289100 5.0kb downstream 5.0kb downstream 7487 true Chr02: 45782339-45789825 Phaseolus vulgaris
Phvul.002G289100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45782339-45787338 Phaseolus vulgaris
Phvul.002G289100 10.0kb upstream 10.0kb upstream 12487 true Chr02: 45787339-45799825 Phaseolus vulgaris
Phvul.002G289100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45789826-45799825 Phaseolus vulgaris
Phvul.002G289100 10.0kb downstream 10.0kb downstream 12487 true Chr02: 45777339-45789825 Phaseolus vulgaris
Phvul.002G289100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45777339-45787338 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310650 5265 Fabidae View MSA
124071033 5270 Rosid View MSA
123752515 5271 Pentapetalae View MSA
122795676 5272 Eudicot View MSA
122049584 5273 Angiosperm View MSA
121311488 5274 Embryophyte View MSA
123348779 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.0229 0.0 75.2798    
cufflinks 13.5423 0.0 35.4277   Low
cufflinks 137.378 0.0 408.162 High High
cufflinks 94.2097 0.0 268.547 High  
cufflinks 99.2711 0.0 283.716 High  
cufflinks 56.3469 0.0 151.569 High  
cufflinks 20.5941 0.0 53.232    
cufflinks 9.50518 0.0 25.394   Low
cufflinks 73.5361 0.0 203.994 High  
cufflinks 55.8741 0.0 149.87 High  
cufflinks 89.5362 0.0 252.818 High  

0 Strain