Gene : Phvul.002G287800 P. vulgaris v2.1
Defline:  (1 of 22) PF04525 - LURP-one-related (LOR) Genomic Order:  2862
Name:  ? Phvul.002G287800 Secondary Identifier:  ? PAC:37177103
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G287800 0.5kb upstream 0.5kb upstream 4826 true Chr02: 45698890-45703715 Phaseolus vulgaris
Phvul.002G287800 0.5kb upstream 0.5kb upstream 500 false Chr02: 45703216-45703715 Phaseolus vulgaris
Phvul.002G287800 0.5kb downstream 0.5kb downstream 4826 true Chr02: 45698390-45703215 Phaseolus vulgaris
Phvul.002G287800 0.5kb downstream 0.5kb downstream 500 false Chr02: 45698390-45698889 Phaseolus vulgaris
Phvul.002G287800 1.0kb upstream 1.0kb upstream 5326 true Chr02: 45698890-45704215 Phaseolus vulgaris
Phvul.002G287800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45703216-45704215 Phaseolus vulgaris
Phvul.002G287800 1.0kb downstream 1.0kb downstream 5326 true Chr02: 45697890-45703215 Phaseolus vulgaris
Phvul.002G287800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45697890-45698889 Phaseolus vulgaris
Phvul.002G287800 2.0kb upstream 2.0kb upstream 6326 true Chr02: 45698890-45705215 Phaseolus vulgaris
Phvul.002G287800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45703216-45705215 Phaseolus vulgaris
Phvul.002G287800 2.0kb downstream 2.0kb downstream 6326 true Chr02: 45696890-45703215 Phaseolus vulgaris
Phvul.002G287800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45696890-45698889 Phaseolus vulgaris
Phvul.002G287800 5.0kb upstream 5.0kb upstream 9326 true Chr02: 45698890-45708215 Phaseolus vulgaris
Phvul.002G287800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45703216-45708215 Phaseolus vulgaris
Phvul.002G287800 5.0kb downstream 5.0kb downstream 9326 true Chr02: 45693890-45703215 Phaseolus vulgaris
Phvul.002G287800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45693890-45698889 Phaseolus vulgaris
Phvul.002G287800 10.0kb upstream 10.0kb upstream 14326 true Chr02: 45698890-45713215 Phaseolus vulgaris
Phvul.002G287800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45703216-45713215 Phaseolus vulgaris
Phvul.002G287800 10.0kb downstream 10.0kb downstream 14326 true Chr02: 45688890-45703215 Phaseolus vulgaris
Phvul.002G287800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45688890-45698889 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305151 5265 Fabidae View MSA
124063316 5270 Rosid View MSA
123746736 5271 Pentapetalae View MSA
122786164 5272 Eudicot View MSA
122048996 5273 Angiosperm View MSA
121311201 5274 Embryophyte View MSA
123348527 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.48511 0.0 16.9969    
cufflinks 4.18649 0.0 13.3669    
cufflinks 12.2536 0.0 34.6916   High
cufflinks 17.1067 0.0 47.3043   High
cufflinks 4.20461 0.0 13.5847    
cufflinks 5.31778 0.0 16.5197    
cufflinks 5.22084 0.0 16.2467    
cufflinks 1.86793 0.0 6.49894   Low
cufflinks 4.01796 0.0 12.8706    
cufflinks 6.31793 0.0 19.3252    
cufflinks 2.58947 0.0 8.79826   Low

0 Strain