Gene : Phvul.002G288500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11260:SF220 - GST-CONTAINING FLYWCH ZINC-FINGER PROTEIN Genomic Order:  2869
Name:  ? Phvul.002G288500 Secondary Identifier:  ? PAC:37176331
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6842 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G288500 0.5kb upstream 0.5kb upstream 4801 true Chr02: 45748680-45753480 Phaseolus vulgaris
Phvul.002G288500 0.5kb upstream 0.5kb upstream 500 false Chr02: 45752981-45753480 Phaseolus vulgaris
Phvul.002G288500 0.5kb downstream 0.5kb downstream 4801 true Chr02: 45748180-45752980 Phaseolus vulgaris
Phvul.002G288500 0.5kb downstream 0.5kb downstream 500 false Chr02: 45748180-45748679 Phaseolus vulgaris
Phvul.002G288500 1.0kb upstream 1.0kb upstream 5301 true Chr02: 45748680-45753980 Phaseolus vulgaris
Phvul.002G288500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45752981-45753980 Phaseolus vulgaris
Phvul.002G288500 1.0kb downstream 1.0kb downstream 5301 true Chr02: 45747680-45752980 Phaseolus vulgaris
Phvul.002G288500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45747680-45748679 Phaseolus vulgaris
Phvul.002G288500 2.0kb upstream 2.0kb upstream 6301 true Chr02: 45748680-45754980 Phaseolus vulgaris
Phvul.002G288500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45752981-45754980 Phaseolus vulgaris
Phvul.002G288500 2.0kb downstream 2.0kb downstream 6301 true Chr02: 45746680-45752980 Phaseolus vulgaris
Phvul.002G288500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45746680-45748679 Phaseolus vulgaris
Phvul.002G288500 5.0kb upstream 5.0kb upstream 9301 true Chr02: 45748680-45757980 Phaseolus vulgaris
Phvul.002G288500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45752981-45757980 Phaseolus vulgaris
Phvul.002G288500 5.0kb downstream 5.0kb downstream 9301 true Chr02: 45743680-45752980 Phaseolus vulgaris
Phvul.002G288500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45743680-45748679 Phaseolus vulgaris
Phvul.002G288500 10.0kb upstream 10.0kb upstream 14301 true Chr02: 45748680-45762980 Phaseolus vulgaris
Phvul.002G288500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45752981-45762980 Phaseolus vulgaris
Phvul.002G288500 10.0kb downstream 10.0kb downstream 14301 true Chr02: 45738680-45752980 Phaseolus vulgaris
Phvul.002G288500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45738680-45748679 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040873 5273 Angiosperm View MSA
122313467 5265 Fabidae View MSA
124063351 5270 Rosid View MSA
123751759 5271 Pentapetalae View MSA
122789366 5272 Eudicot View MSA
121350998 5274 Embryophyte View MSA
123428193 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.61769 0.0 2.87517    
cufflinks 0.429513 0.0 1.9166 Low  
cufflinks 0.83575 0.0 3.30401    
cufflinks 1.05056 0.0 4.69927    
cufflinks 0.757036 0.0 3.16396    
cufflinks 0.197307 0.0 1.27995 Low Low
cufflinks 0.865773 0.0 3.56151    
cufflinks 0.801436 0.0 3.12629    
cufflinks 1.89694 0.0 7.29326   High
cufflinks 0.695088 0.0 3.26483    
cufflinks 0.320837 0.0 1.71424 Low Low

0 Strain