Gene : Phvul.002G288400 P. vulgaris v2.1
Defline:  (1 of 6) K17686 - Cu+-exporting ATPase (copA, ATP7) Genomic Order:  2868
Name:  ? Phvul.002G288400 Secondary Identifier:  ? PAC:37176444
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G288400 0.5kb upstream 0.5kb upstream 4236 true Chr02: 45744514-45748749 Phaseolus vulgaris
Phvul.002G288400 0.5kb upstream 0.5kb upstream 500 false Chr02: 45744514-45745013 Phaseolus vulgaris
Phvul.002G288400 0.5kb downstream 0.5kb downstream 4236 true Chr02: 45745014-45749249 Phaseolus vulgaris
Phvul.002G288400 0.5kb downstream 0.5kb downstream 500 false Chr02: 45748750-45749249 Phaseolus vulgaris
Phvul.002G288400 1.0kb upstream 1.0kb upstream 4736 true Chr02: 45744014-45748749 Phaseolus vulgaris
Phvul.002G288400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45744014-45745013 Phaseolus vulgaris
Phvul.002G288400 1.0kb downstream 1.0kb downstream 4736 true Chr02: 45745014-45749749 Phaseolus vulgaris
Phvul.002G288400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45748750-45749749 Phaseolus vulgaris
Phvul.002G288400 2.0kb upstream 2.0kb upstream 5736 true Chr02: 45743014-45748749 Phaseolus vulgaris
Phvul.002G288400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45743014-45745013 Phaseolus vulgaris
Phvul.002G288400 2.0kb downstream 2.0kb downstream 5736 true Chr02: 45745014-45750749 Phaseolus vulgaris
Phvul.002G288400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45748750-45750749 Phaseolus vulgaris
Phvul.002G288400 5.0kb upstream 5.0kb upstream 8736 true Chr02: 45740014-45748749 Phaseolus vulgaris
Phvul.002G288400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45740014-45745013 Phaseolus vulgaris
Phvul.002G288400 5.0kb downstream 5.0kb downstream 8736 true Chr02: 45745014-45753749 Phaseolus vulgaris
Phvul.002G288400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45748750-45753749 Phaseolus vulgaris
Phvul.002G288400 10.0kb upstream 10.0kb upstream 13736 true Chr02: 45735014-45748749 Phaseolus vulgaris
Phvul.002G288400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45735014-45745013 Phaseolus vulgaris
Phvul.002G288400 10.0kb downstream 10.0kb downstream 13736 true Chr02: 45745014-45758749 Phaseolus vulgaris
Phvul.002G288400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45748750-45758749 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308633 5265 Fabidae View MSA
124069663 5270 Rosid View MSA
123747003 5271 Pentapetalae View MSA
122794490 5272 Eudicot View MSA
122042760 5273 Angiosperm View MSA
121351146 5274 Embryophyte View MSA
123426796 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.00927023 0.0 0.127086 Low Low
cufflinks 0.0782666 0.0 0.428368 Low  
cufflinks 0.0792164 0.0 0.498093 Low  
cufflinks 0.0368472 0.0 0.337855 Low  
cufflinks 0.114627 0.0 0.630285 Low  
cufflinks 0.190012 0.0 0.772773 Low  
cufflinks 0.13399 0.0 0.712784 Low  
cufflinks 0.0589709 0.0 0.406912 Low  
cufflinks 0.068677 0.0 0.562206 Low  
cufflinks 0.266049 0.0 1.1438 Low High
cufflinks 0.154074 0.0 0.682893 Low  

0 Strain