Gene : Phvul.002G288600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11260:SF220 - GST-CONTAINING FLYWCH ZINC-FINGER PROTEIN Genomic Order:  2870
Name:  ? Phvul.002G288600 Secondary Identifier:  ? PAC:37176973
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6842 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G288600 0.5kb upstream 0.5kb upstream 3602 true Chr02: 45753555-45757156 Phaseolus vulgaris
Phvul.002G288600 0.5kb upstream 0.5kb upstream 500 false Chr02: 45756657-45757156 Phaseolus vulgaris
Phvul.002G288600 0.5kb downstream 0.5kb downstream 3602 true Chr02: 45753055-45756656 Phaseolus vulgaris
Phvul.002G288600 0.5kb downstream 0.5kb downstream 500 false Chr02: 45753055-45753554 Phaseolus vulgaris
Phvul.002G288600 1.0kb upstream 1.0kb upstream 4102 true Chr02: 45753555-45757656 Phaseolus vulgaris
Phvul.002G288600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45756657-45757656 Phaseolus vulgaris
Phvul.002G288600 1.0kb downstream 1.0kb downstream 4102 true Chr02: 45752555-45756656 Phaseolus vulgaris
Phvul.002G288600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45752555-45753554 Phaseolus vulgaris
Phvul.002G288600 2.0kb upstream 2.0kb upstream 5102 true Chr02: 45753555-45758656 Phaseolus vulgaris
Phvul.002G288600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45756657-45758656 Phaseolus vulgaris
Phvul.002G288600 2.0kb downstream 2.0kb downstream 5102 true Chr02: 45751555-45756656 Phaseolus vulgaris
Phvul.002G288600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45751555-45753554 Phaseolus vulgaris
Phvul.002G288600 5.0kb upstream 5.0kb upstream 8102 true Chr02: 45753555-45761656 Phaseolus vulgaris
Phvul.002G288600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45756657-45761656 Phaseolus vulgaris
Phvul.002G288600 5.0kb downstream 5.0kb downstream 8102 true Chr02: 45748555-45756656 Phaseolus vulgaris
Phvul.002G288600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45748555-45753554 Phaseolus vulgaris
Phvul.002G288600 10.0kb upstream 10.0kb upstream 13102 true Chr02: 45753555-45766656 Phaseolus vulgaris
Phvul.002G288600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45756657-45766656 Phaseolus vulgaris
Phvul.002G288600 10.0kb downstream 10.0kb downstream 13102 true Chr02: 45743555-45756656 Phaseolus vulgaris
Phvul.002G288600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45743555-45753554 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040873 5273 Angiosperm View MSA
122313467 5265 Fabidae View MSA
124063351 5270 Rosid View MSA
123751759 5271 Pentapetalae View MSA
122789366 5272 Eudicot View MSA
121350998 5274 Embryophyte View MSA
123428193 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.787 0.0 67.2356   High
cufflinks 12.7471 0.0 34.9315    
cufflinks 13.7475 0.0 37.3992    
cufflinks 15.3315 0.0 41.4479    
cufflinks 11.7573 0.0 32.5915    
cufflinks 10.9849 0.0 30.5097   Low
cufflinks 13.1614 0.0 35.9611    
cufflinks 11.5414 0.0 31.7724    
cufflinks 16.8343 0.0 45.1042    
cufflinks 19.9465 0.0 52.8061   High
cufflinks 13.6207 0.0 37.2506    

0 Strain