Gene : Phvul.002G290000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11514:SF37 - TRANSCRIPTION FACTOR EGL1-RELATED Genomic Order:  2884
Name:  ? Phvul.002G290000 Secondary Identifier:  ? PAC:37176083
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G290000 0.5kb upstream 0.5kb upstream 4931 true Chr02: 45866157-45871087 Phaseolus vulgaris
Phvul.002G290000 0.5kb upstream 0.5kb upstream 500 false Chr02: 45866157-45866656 Phaseolus vulgaris
Phvul.002G290000 0.5kb downstream 0.5kb downstream 4931 true Chr02: 45866657-45871587 Phaseolus vulgaris
Phvul.002G290000 0.5kb downstream 0.5kb downstream 500 false Chr02: 45871088-45871587 Phaseolus vulgaris
Phvul.002G290000 1.0kb upstream 1.0kb upstream 5431 true Chr02: 45865657-45871087 Phaseolus vulgaris
Phvul.002G290000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45865657-45866656 Phaseolus vulgaris
Phvul.002G290000 1.0kb downstream 1.0kb downstream 5431 true Chr02: 45866657-45872087 Phaseolus vulgaris
Phvul.002G290000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45871088-45872087 Phaseolus vulgaris
Phvul.002G290000 2.0kb upstream 2.0kb upstream 6431 true Chr02: 45864657-45871087 Phaseolus vulgaris
Phvul.002G290000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45864657-45866656 Phaseolus vulgaris
Phvul.002G290000 2.0kb downstream 2.0kb downstream 6431 true Chr02: 45866657-45873087 Phaseolus vulgaris
Phvul.002G290000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45871088-45873087 Phaseolus vulgaris
Phvul.002G290000 5.0kb upstream 5.0kb upstream 9431 true Chr02: 45861657-45871087 Phaseolus vulgaris
Phvul.002G290000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45861657-45866656 Phaseolus vulgaris
Phvul.002G290000 5.0kb downstream 5.0kb downstream 9431 true Chr02: 45866657-45876087 Phaseolus vulgaris
Phvul.002G290000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45871088-45876087 Phaseolus vulgaris
Phvul.002G290000 10.0kb upstream 10.0kb upstream 14431 true Chr02: 45856657-45871087 Phaseolus vulgaris
Phvul.002G290000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45856657-45866656 Phaseolus vulgaris
Phvul.002G290000 10.0kb downstream 10.0kb downstream 14431 true Chr02: 45866657-45881087 Phaseolus vulgaris
Phvul.002G290000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45871088-45881087 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302099 5265 Fabidae View MSA
124074803 5270 Rosid View MSA
123747092 5271 Pentapetalae View MSA
122794545 5272 Eudicot View MSA
122045232 5273 Angiosperm View MSA
121347746 5274 Embryophyte View MSA
123380612 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.4806 0.0 14.8132    
cufflinks 5.4531 0.0 21.6738    
cufflinks 4.13426 0.0 16.7734    
cufflinks 1.4703 0.0 5.06667   Low
cufflinks 2.96167 0.0 14.2079    
cufflinks 7.6339 0.0 28.0097    
cufflinks 19.5163 0.0 65.9981   High
cufflinks 11.9773 0.0 40.934    
cufflinks 14.4017 0.0 53.6804   High
cufflinks 7.89812 0.0 29.1873    
cufflinks 4.09016 0.0 17.7965    

0 Strain