Gene : Phvul.002G290100 P. vulgaris v2.1
Defline:  (1 of 1) 6.3.5.2 - GMP synthase (glutamine-hydrolyzing) / GMP synthetase (glutamine-hydrolyzing) Genomic Order:  2885
Name:  ? Phvul.002G290100 Secondary Identifier:  ? PAC:37177273
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris CITRULBIO-PWY Phaseolus vulgaris pathologic  
Pvulgaris GLUTAMINDEG-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-7221 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7228 Phaseolus vulgaris pathologic  
Pvulgaris PWY-841 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G290100 0.5kb upstream 0.5kb upstream 3512 true Chr02: 45874326-45877837 Phaseolus vulgaris
Phvul.002G290100 0.5kb upstream 0.5kb upstream 500 false Chr02: 45874326-45874825 Phaseolus vulgaris
Phvul.002G290100 0.5kb downstream 0.5kb downstream 3512 true Chr02: 45874826-45878337 Phaseolus vulgaris
Phvul.002G290100 0.5kb downstream 0.5kb downstream 500 false Chr02: 45877838-45878337 Phaseolus vulgaris
Phvul.002G290100 1.0kb upstream 1.0kb upstream 4012 true Chr02: 45873826-45877837 Phaseolus vulgaris
Phvul.002G290100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45873826-45874825 Phaseolus vulgaris
Phvul.002G290100 1.0kb downstream 1.0kb downstream 4012 true Chr02: 45874826-45878837 Phaseolus vulgaris
Phvul.002G290100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45877838-45878837 Phaseolus vulgaris
Phvul.002G290100 2.0kb upstream 2.0kb upstream 5012 true Chr02: 45872826-45877837 Phaseolus vulgaris
Phvul.002G290100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45872826-45874825 Phaseolus vulgaris
Phvul.002G290100 2.0kb downstream 2.0kb downstream 5012 true Chr02: 45874826-45879837 Phaseolus vulgaris
Phvul.002G290100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45877838-45879837 Phaseolus vulgaris
Phvul.002G290100 5.0kb upstream 5.0kb upstream 8012 true Chr02: 45869826-45877837 Phaseolus vulgaris
Phvul.002G290100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45869826-45874825 Phaseolus vulgaris
Phvul.002G290100 5.0kb downstream 5.0kb downstream 8012 true Chr02: 45874826-45882837 Phaseolus vulgaris
Phvul.002G290100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45877838-45882837 Phaseolus vulgaris
Phvul.002G290100 10.0kb upstream 10.0kb upstream 13012 true Chr02: 45864826-45877837 Phaseolus vulgaris
Phvul.002G290100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45864826-45874825 Phaseolus vulgaris
Phvul.002G290100 10.0kb downstream 10.0kb downstream 13012 true Chr02: 45874826-45887837 Phaseolus vulgaris
Phvul.002G290100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45877838-45887837 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302859 5265 Fabidae View MSA
124062269 5270 Rosid View MSA
123739026 5271 Pentapetalae View MSA
122786082 5272 Eudicot View MSA
122049121 5273 Angiosperm View MSA
121346337 5274 Embryophyte View MSA
123424284 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.412 0.0 34.8588    
cufflinks 21.5574 0.0 55.7406   High
cufflinks 9.44239 0.0 25.0396   Low
cufflinks 16.27 0.0 42.1334    
cufflinks 13.952 0.0 36.2089    
cufflinks 9.96341 0.0 26.3197   Low
cufflinks 15.9081 0.0 41.1735    
cufflinks 12.1588 0.0 31.7545    
cufflinks 21.9552 0.0 56.7822   High
cufflinks 9.22567 0.0 24.4836   Low
cufflinks 14.2412 0.0 36.9553    

0 Strain