Gene : Phvul.002G281400 P. vulgaris v2.1
Defline:  (1 of 4) PTHR10857:SF26 - PROTEIN BONZAI 3 Genomic Order:  2795
Name:  ? Phvul.002G281400 Secondary Identifier:  ? PAC:37176975
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G281400 0.5kb upstream 0.5kb upstream 13832 true Chr02: 45041272-45055103 Phaseolus vulgaris
Phvul.002G281400 0.5kb upstream 0.5kb upstream 500 false Chr02: 45054604-45055103 Phaseolus vulgaris
Phvul.002G281400 0.5kb downstream 0.5kb downstream 13832 true Chr02: 45040772-45054603 Phaseolus vulgaris
Phvul.002G281400 0.5kb downstream 0.5kb downstream 500 false Chr02: 45040772-45041271 Phaseolus vulgaris
Phvul.002G281400 1.0kb upstream 1.0kb upstream 14332 true Chr02: 45041272-45055603 Phaseolus vulgaris
Phvul.002G281400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45054604-45055603 Phaseolus vulgaris
Phvul.002G281400 1.0kb downstream 1.0kb downstream 14332 true Chr02: 45040272-45054603 Phaseolus vulgaris
Phvul.002G281400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45040272-45041271 Phaseolus vulgaris
Phvul.002G281400 2.0kb upstream 2.0kb upstream 15332 true Chr02: 45041272-45056603 Phaseolus vulgaris
Phvul.002G281400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45054604-45056603 Phaseolus vulgaris
Phvul.002G281400 2.0kb downstream 2.0kb downstream 15332 true Chr02: 45039272-45054603 Phaseolus vulgaris
Phvul.002G281400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45039272-45041271 Phaseolus vulgaris
Phvul.002G281400 5.0kb upstream 5.0kb upstream 18332 true Chr02: 45041272-45059603 Phaseolus vulgaris
Phvul.002G281400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45054604-45059603 Phaseolus vulgaris
Phvul.002G281400 5.0kb downstream 5.0kb downstream 18332 true Chr02: 45036272-45054603 Phaseolus vulgaris
Phvul.002G281400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45036272-45041271 Phaseolus vulgaris
Phvul.002G281400 10.0kb upstream 10.0kb upstream 23332 true Chr02: 45041272-45064603 Phaseolus vulgaris
Phvul.002G281400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45054604-45064603 Phaseolus vulgaris
Phvul.002G281400 10.0kb downstream 10.0kb downstream 23332 true Chr02: 45031272-45054603 Phaseolus vulgaris
Phvul.002G281400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45031272-45041271 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306005 5265 Fabidae View MSA
124064124 5270 Rosid View MSA
123745064 5271 Pentapetalae View MSA
122788484 5272 Eudicot View MSA
122043843 5273 Angiosperm View MSA
121351001 5274 Embryophyte View MSA
123424570 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.7609 0.0 23.9715    
cufflinks 5.92377 0.0 19.0553   Low
cufflinks 8.4725 0.0 25.5894   High
cufflinks 7.81464 0.0 24.6537    
cufflinks 6.81088 0.0 21.4758   Low
cufflinks 8.41306 0.0 25.5791    
cufflinks 7.7252 0.0 23.8971    
cufflinks 7.42358 0.0 22.8968    
cufflinks 8.45526 0.0 25.9887   High
cufflinks 7.49561 0.0 23.2934    
cufflinks 7.4933 0.0 23.4158    

0 Strain