Gene : Phvul.002G281900 P. vulgaris v2.1
Defline:  (1 of 1) K03428 - magnesium-protoporphyrin O-methyltransferase (E2.1.1.11, chlM, bchM) Genomic Order:  2800
Name:  ? Phvul.002G281900 Secondary Identifier:  ? PAC:37178749
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris CHLOROPHYLL-SYN Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G281900 0.5kb upstream 0.5kb upstream 4273 true Chr02: 45091777-45096049 Phaseolus vulgaris
Phvul.002G281900 0.5kb upstream 0.5kb upstream 500 false Chr02: 45095550-45096049 Phaseolus vulgaris
Phvul.002G281900 0.5kb downstream 0.5kb downstream 4273 true Chr02: 45091277-45095549 Phaseolus vulgaris
Phvul.002G281900 0.5kb downstream 0.5kb downstream 500 false Chr02: 45091277-45091776 Phaseolus vulgaris
Phvul.002G281900 1.0kb upstream 1.0kb upstream 4773 true Chr02: 45091777-45096549 Phaseolus vulgaris
Phvul.002G281900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45095550-45096549 Phaseolus vulgaris
Phvul.002G281900 1.0kb downstream 1.0kb downstream 4773 true Chr02: 45090777-45095549 Phaseolus vulgaris
Phvul.002G281900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45090777-45091776 Phaseolus vulgaris
Phvul.002G281900 2.0kb upstream 2.0kb upstream 5773 true Chr02: 45091777-45097549 Phaseolus vulgaris
Phvul.002G281900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45095550-45097549 Phaseolus vulgaris
Phvul.002G281900 2.0kb downstream 2.0kb downstream 5773 true Chr02: 45089777-45095549 Phaseolus vulgaris
Phvul.002G281900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45089777-45091776 Phaseolus vulgaris
Phvul.002G281900 5.0kb upstream 5.0kb upstream 8773 true Chr02: 45091777-45100549 Phaseolus vulgaris
Phvul.002G281900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45095550-45100549 Phaseolus vulgaris
Phvul.002G281900 5.0kb downstream 5.0kb downstream 8773 true Chr02: 45086777-45095549 Phaseolus vulgaris
Phvul.002G281900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45086777-45091776 Phaseolus vulgaris
Phvul.002G281900 10.0kb upstream 10.0kb upstream 13773 true Chr02: 45091777-45105549 Phaseolus vulgaris
Phvul.002G281900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45095550-45105549 Phaseolus vulgaris
Phvul.002G281900 10.0kb downstream 10.0kb downstream 13773 true Chr02: 45081777-45095549 Phaseolus vulgaris
Phvul.002G281900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45081777-45091776 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303274 5265 Fabidae View MSA
124063619 5270 Rosid View MSA
123739209 5271 Pentapetalae View MSA
122792870 5272 Eudicot View MSA
122043100 5273 Angiosperm View MSA
121345477 5274 Embryophyte View MSA
123424951 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.162 0.0 133.86 High  
cufflinks 75.4844 0.0 261.267 High  
cufflinks 331.474 0.0 1503.19 High High
cufflinks 34.9547 0.0 109.582 High  
cufflinks 44.2836 0.0 141.72 High  
cufflinks 113.393 0.0 429.256 High  
cufflinks 1.09567 0.0 5.58688   Low
cufflinks 1.07024 0.0 5.57392   Low
cufflinks 0.931046 0.0 4.86411   Low
cufflinks 49.3617 0.0 159.255 High  
cufflinks 31.5987 0.0 98.7735    

0 Strain