Gene : Phvul.002G280200 P. vulgaris v2.1
Defline:  (1 of 2) K08054 - calnexin (CANX) Genomic Order:  2783
Name:  ? Phvul.002G280200 Secondary Identifier:  ? PAC:37176836
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G280200 0.5kb upstream 0.5kb upstream 4191 true Chr02: 44952819-44957009 Phaseolus vulgaris
Phvul.002G280200 0.5kb upstream 0.5kb upstream 500 false Chr02: 44956510-44957009 Phaseolus vulgaris
Phvul.002G280200 0.5kb downstream 0.5kb downstream 4191 true Chr02: 44952319-44956509 Phaseolus vulgaris
Phvul.002G280200 0.5kb downstream 0.5kb downstream 500 false Chr02: 44952319-44952818 Phaseolus vulgaris
Phvul.002G280200 1.0kb upstream 1.0kb upstream 4691 true Chr02: 44952819-44957509 Phaseolus vulgaris
Phvul.002G280200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44956510-44957509 Phaseolus vulgaris
Phvul.002G280200 1.0kb downstream 1.0kb downstream 4691 true Chr02: 44951819-44956509 Phaseolus vulgaris
Phvul.002G280200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44951819-44952818 Phaseolus vulgaris
Phvul.002G280200 2.0kb upstream 2.0kb upstream 5691 true Chr02: 44952819-44958509 Phaseolus vulgaris
Phvul.002G280200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44956510-44958509 Phaseolus vulgaris
Phvul.002G280200 2.0kb downstream 2.0kb downstream 5691 true Chr02: 44950819-44956509 Phaseolus vulgaris
Phvul.002G280200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44950819-44952818 Phaseolus vulgaris
Phvul.002G280200 5.0kb upstream 5.0kb upstream 8691 true Chr02: 44952819-44961509 Phaseolus vulgaris
Phvul.002G280200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44956510-44961509 Phaseolus vulgaris
Phvul.002G280200 5.0kb downstream 5.0kb downstream 8691 true Chr02: 44947819-44956509 Phaseolus vulgaris
Phvul.002G280200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44947819-44952818 Phaseolus vulgaris
Phvul.002G280200 10.0kb upstream 10.0kb upstream 13691 true Chr02: 44952819-44966509 Phaseolus vulgaris
Phvul.002G280200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44956510-44966509 Phaseolus vulgaris
Phvul.002G280200 10.0kb downstream 10.0kb downstream 13691 true Chr02: 44942819-44956509 Phaseolus vulgaris
Phvul.002G280200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44942819-44952818 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313038 5265 Fabidae View MSA
124065141 5270 Rosid View MSA
123737774 5271 Pentapetalae View MSA
122786584 5272 Eudicot View MSA
122045156 5273 Angiosperm View MSA
121344983 5274 Embryophyte View MSA
123428269 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 61.8992 0.0 171.502 High Low
cufflinks 140.566 0.0 432.681 High High
cufflinks 75.6831 0.0 214.447 High  
cufflinks 73.183 0.0 204.554 High  
cufflinks 73.8531 0.0 206.275 High  
cufflinks 82.9901 0.0 237.656 High  
cufflinks 100.981 0.0 297.394 High  
cufflinks 126.214 0.0 385.049 High High
cufflinks 92.457 0.0 268.728 High  
cufflinks 76.8426 0.0 216.731 High  
cufflinks 90.0506 0.0 258.227 High  

0 Strain