Gene : Phvul.002G280400 P. vulgaris v2.1
Genomic Order:  2785 Name:  ? Phvul.002G280400
Secondary Identifier:  ? PAC:37177885
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G280400 0.5kb upstream 0.5kb upstream 1616 true Chr02: 44969762-44971377 Phaseolus vulgaris
Phvul.002G280400 0.5kb upstream 0.5kb upstream 500 false Chr02: 44970878-44971377 Phaseolus vulgaris
Phvul.002G280400 0.5kb downstream 0.5kb downstream 1616 true Chr02: 44969262-44970877 Phaseolus vulgaris
Phvul.002G280400 0.5kb downstream 0.5kb downstream 500 false Chr02: 44969262-44969761 Phaseolus vulgaris
Phvul.002G280400 1.0kb upstream 1.0kb upstream 2116 true Chr02: 44969762-44971877 Phaseolus vulgaris
Phvul.002G280400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44970878-44971877 Phaseolus vulgaris
Phvul.002G280400 1.0kb downstream 1.0kb downstream 2116 true Chr02: 44968762-44970877 Phaseolus vulgaris
Phvul.002G280400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44968762-44969761 Phaseolus vulgaris
Phvul.002G280400 2.0kb upstream 2.0kb upstream 3116 true Chr02: 44969762-44972877 Phaseolus vulgaris
Phvul.002G280400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44970878-44972877 Phaseolus vulgaris
Phvul.002G280400 2.0kb downstream 2.0kb downstream 3116 true Chr02: 44967762-44970877 Phaseolus vulgaris
Phvul.002G280400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44967762-44969761 Phaseolus vulgaris
Phvul.002G280400 5.0kb upstream 5.0kb upstream 6116 true Chr02: 44969762-44975877 Phaseolus vulgaris
Phvul.002G280400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44970878-44975877 Phaseolus vulgaris
Phvul.002G280400 5.0kb downstream 5.0kb downstream 6116 true Chr02: 44964762-44970877 Phaseolus vulgaris
Phvul.002G280400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44964762-44969761 Phaseolus vulgaris
Phvul.002G280400 10.0kb upstream 10.0kb upstream 11116 true Chr02: 44969762-44980877 Phaseolus vulgaris
Phvul.002G280400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44970878-44980877 Phaseolus vulgaris
Phvul.002G280400 10.0kb downstream 10.0kb downstream 11116 true Chr02: 44959762-44970877 Phaseolus vulgaris
Phvul.002G280400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44959762-44969761 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026487 5273 Angiosperm View MSA
122302704 5265 Fabidae View MSA
124073800 5270 Rosid View MSA
123751599 5271 Pentapetalae View MSA
122796224 5272 Eudicot View MSA
121296355 5274 Embryophyte View MSA
123334534 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.85302 0.0 6.30147    
cufflinks 1.26549 0.0 4.48535    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.23807 0.0 13.0765   High
cufflinks 1.10384 0.0 3.98609    
cufflinks 0.486859 0.0 1.8741 Low  
cufflinks 0.295249 0.0 1.17533 Low  
cufflinks 0.126867 0.0 0.543836 Low Low
cufflinks 0.382961 0.0 1.49212 Low  
cufflinks 1.27406 0.0 4.52964    
cufflinks 0.681427 0.0 2.55106    

0 Strain