Gene : Phvul.002G285200 P. vulgaris v2.1
Defline:  (1 of 3) 1.1.1.146 - 11-beta-hydroxysteroid dehydrogenase / Corticosteroid 11-beta-dehydrogenase Genomic Order:  2833
Name:  ? Phvul.002G285200 Secondary Identifier:  ? PAC:37175227
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G285200 0.5kb upstream 0.5kb upstream 9243 true Chr02: 45407197-45416439 Phaseolus vulgaris
Phvul.002G285200 0.5kb upstream 0.5kb upstream 500 false Chr02: 45415940-45416439 Phaseolus vulgaris
Phvul.002G285200 0.5kb downstream 0.5kb downstream 9243 true Chr02: 45406697-45415939 Phaseolus vulgaris
Phvul.002G285200 0.5kb downstream 0.5kb downstream 500 false Chr02: 45406697-45407196 Phaseolus vulgaris
Phvul.002G285200 1.0kb upstream 1.0kb upstream 9743 true Chr02: 45407197-45416939 Phaseolus vulgaris
Phvul.002G285200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45415940-45416939 Phaseolus vulgaris
Phvul.002G285200 1.0kb downstream 1.0kb downstream 9743 true Chr02: 45406197-45415939 Phaseolus vulgaris
Phvul.002G285200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45406197-45407196 Phaseolus vulgaris
Phvul.002G285200 2.0kb upstream 2.0kb upstream 10743 true Chr02: 45407197-45417939 Phaseolus vulgaris
Phvul.002G285200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45415940-45417939 Phaseolus vulgaris
Phvul.002G285200 2.0kb downstream 2.0kb downstream 10743 true Chr02: 45405197-45415939 Phaseolus vulgaris
Phvul.002G285200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45405197-45407196 Phaseolus vulgaris
Phvul.002G285200 5.0kb upstream 5.0kb upstream 13743 true Chr02: 45407197-45420939 Phaseolus vulgaris
Phvul.002G285200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45415940-45420939 Phaseolus vulgaris
Phvul.002G285200 5.0kb downstream 5.0kb downstream 13743 true Chr02: 45402197-45415939 Phaseolus vulgaris
Phvul.002G285200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45402197-45407196 Phaseolus vulgaris
Phvul.002G285200 10.0kb upstream 10.0kb upstream 18743 true Chr02: 45407197-45425939 Phaseolus vulgaris
Phvul.002G285200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45415940-45425939 Phaseolus vulgaris
Phvul.002G285200 10.0kb downstream 10.0kb downstream 18743 true Chr02: 45397197-45415939 Phaseolus vulgaris
Phvul.002G285200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45397197-45407196 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296345 5265 Fabidae View MSA
124071912 5270 Rosid View MSA
123743335 5271 Pentapetalae View MSA
122796337 5272 Eudicot View MSA
122047684 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121345666 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.1165 0.0 66.0716    
cufflinks 3.73743 0.0 18.7087    
cufflinks 34.6773 0.0 136.738    
cufflinks 48.3936 0.0 189.834 High High
cufflinks 9.8729 0.0 45.2261    
cufflinks 32.984 0.0 129.178 High  
cufflinks 0.34859 0.0 1.3786 Low Low
cufflinks 0.127469 0.0 0.555577 Low Low
cufflinks 0.113621 0.0 0.49986 Low Low
cufflinks 2.5 0.0 14.8239    
cufflinks 10.5853 0.0 46.9542    

0 Strain