Gene : Phvul.002G275200 P. vulgaris v2.1
Defline:  (1 of 3) PTHR11699:SF171 - ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC Genomic Order:  2729
Name:  ? Phvul.002G275200 Secondary Identifier:  ? PAC:37175109
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-2724 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6054 Phaseolus vulgaris pathologic  
Pvulgaris PWY66-21 Phaseolus vulgaris pathologic  
Pvulgaris PWY66-389 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G275200 0.5kb upstream 0.5kb upstream 7398 true Chr02: 44498293-44505690 Phaseolus vulgaris
Phvul.002G275200 0.5kb upstream 0.5kb upstream 500 false Chr02: 44505191-44505690 Phaseolus vulgaris
Phvul.002G275200 0.5kb downstream 0.5kb downstream 7398 true Chr02: 44497793-44505190 Phaseolus vulgaris
Phvul.002G275200 0.5kb downstream 0.5kb downstream 500 false Chr02: 44497793-44498292 Phaseolus vulgaris
Phvul.002G275200 1.0kb upstream 1.0kb upstream 7898 true Chr02: 44498293-44506190 Phaseolus vulgaris
Phvul.002G275200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44505191-44506190 Phaseolus vulgaris
Phvul.002G275200 1.0kb downstream 1.0kb downstream 7898 true Chr02: 44497293-44505190 Phaseolus vulgaris
Phvul.002G275200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44497293-44498292 Phaseolus vulgaris
Phvul.002G275200 2.0kb upstream 2.0kb upstream 8898 true Chr02: 44498293-44507190 Phaseolus vulgaris
Phvul.002G275200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44505191-44507190 Phaseolus vulgaris
Phvul.002G275200 2.0kb downstream 2.0kb downstream 8898 true Chr02: 44496293-44505190 Phaseolus vulgaris
Phvul.002G275200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44496293-44498292 Phaseolus vulgaris
Phvul.002G275200 5.0kb upstream 5.0kb upstream 11898 true Chr02: 44498293-44510190 Phaseolus vulgaris
Phvul.002G275200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44505191-44510190 Phaseolus vulgaris
Phvul.002G275200 5.0kb downstream 5.0kb downstream 11898 true Chr02: 44493293-44505190 Phaseolus vulgaris
Phvul.002G275200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44493293-44498292 Phaseolus vulgaris
Phvul.002G275200 10.0kb upstream 10.0kb upstream 16898 true Chr02: 44498293-44515190 Phaseolus vulgaris
Phvul.002G275200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44505191-44515190 Phaseolus vulgaris
Phvul.002G275200 10.0kb downstream 10.0kb downstream 16898 true Chr02: 44488293-44505190 Phaseolus vulgaris
Phvul.002G275200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44488293-44498292 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303968 5265 Fabidae View MSA
124071959 5270 Rosid View MSA
123741483 5271 Pentapetalae View MSA
122790699 5272 Eudicot View MSA
122047593 5273 Angiosperm View MSA
121349887 5274 Embryophyte View MSA
123425420 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.83 0.0 41.2272    
cufflinks 14.1129 0.0 51.8391    
cufflinks 17.7299 0.0 63.3618    
cufflinks 7.10126 0.0 22.5187    
cufflinks 4.02501 0.0 14.9277    
cufflinks 16.0184 0.0 57.7456    
cufflinks 0.0586054 0.0 0.265349 Low Low
cufflinks 0.0271104 0.0 0.139945 Low Low
cufflinks 0.0410647 0.0 0.189501 Low Low
cufflinks 9.66154 0.0 37.8825    
cufflinks 6.14699 0.0 23.8865    

0 Strain