Gene : Phvul.002G275400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22952//PTHR22952:SF130 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2731
Name:  ? Phvul.002G275400 Secondary Identifier:  ? PAC:37175148
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G275400 0.5kb upstream 0.5kb upstream 1577 true Chr02: 44521524-44523100 Phaseolus vulgaris
Phvul.002G275400 0.5kb upstream 0.5kb upstream 500 false Chr02: 44522601-44523100 Phaseolus vulgaris
Phvul.002G275400 0.5kb downstream 0.5kb downstream 1577 true Chr02: 44521024-44522600 Phaseolus vulgaris
Phvul.002G275400 0.5kb downstream 0.5kb downstream 500 false Chr02: 44521024-44521523 Phaseolus vulgaris
Phvul.002G275400 1.0kb upstream 1.0kb upstream 2077 true Chr02: 44521524-44523600 Phaseolus vulgaris
Phvul.002G275400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44522601-44523600 Phaseolus vulgaris
Phvul.002G275400 1.0kb downstream 1.0kb downstream 2077 true Chr02: 44520524-44522600 Phaseolus vulgaris
Phvul.002G275400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44520524-44521523 Phaseolus vulgaris
Phvul.002G275400 2.0kb upstream 2.0kb upstream 3077 true Chr02: 44521524-44524600 Phaseolus vulgaris
Phvul.002G275400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44522601-44524600 Phaseolus vulgaris
Phvul.002G275400 2.0kb downstream 2.0kb downstream 3077 true Chr02: 44519524-44522600 Phaseolus vulgaris
Phvul.002G275400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44519524-44521523 Phaseolus vulgaris
Phvul.002G275400 5.0kb upstream 5.0kb upstream 6077 true Chr02: 44521524-44527600 Phaseolus vulgaris
Phvul.002G275400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44522601-44527600 Phaseolus vulgaris
Phvul.002G275400 5.0kb downstream 5.0kb downstream 6077 true Chr02: 44516524-44522600 Phaseolus vulgaris
Phvul.002G275400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44516524-44521523 Phaseolus vulgaris
Phvul.002G275400 10.0kb upstream 10.0kb upstream 11077 true Chr02: 44521524-44532600 Phaseolus vulgaris
Phvul.002G275400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44522601-44532600 Phaseolus vulgaris
Phvul.002G275400 10.0kb downstream 10.0kb downstream 11077 true Chr02: 44511524-44522600 Phaseolus vulgaris
Phvul.002G275400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44511524-44521523 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306892 5265 Fabidae View MSA
124070916 5270 Rosid View MSA
123746178 5271 Pentapetalae View MSA
122797836 5272 Eudicot View MSA
122044806 5273 Angiosperm View MSA
121350176 5274 Embryophyte View MSA
123381607 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.30364 0.0 7.50351    
cufflinks 0.797805 0.0 2.89913    
cufflinks 0.308584 0.0 1.21018 Low  
cufflinks 0.0526001 0.0 0.244335 Low Low
cufflinks 2.06469 0.0 6.83978    
cufflinks 0.131212 0.0 0.551518 Low Low
cufflinks 2.75053 0.0 8.71298    
cufflinks 0.849558 0.0 3.06006    
cufflinks 0.755443 0.0 2.75139    
cufflinks 1.06239 0.0 3.77217    
cufflinks 4.09831 0.0 12.5093   High

0 Strain