Gene : Phvul.002G275600 P. vulgaris v2.1
Defline:  (1 of 1) K17872 - NADH:ubiquinone reductase (non-electrogenic) (ndh2) Genomic Order:  2733
Name:  ? Phvul.002G275600 Secondary Identifier:  ? PAC:37175049
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7279 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G275600 0.5kb upstream 0.5kb upstream 5318 true Chr02: 44542347-44547664 Phaseolus vulgaris
Phvul.002G275600 0.5kb upstream 0.5kb upstream 500 false Chr02: 44542347-44542846 Phaseolus vulgaris
Phvul.002G275600 0.5kb downstream 0.5kb downstream 5318 true Chr02: 44542847-44548164 Phaseolus vulgaris
Phvul.002G275600 0.5kb downstream 0.5kb downstream 500 false Chr02: 44547665-44548164 Phaseolus vulgaris
Phvul.002G275600 1.0kb upstream 1.0kb upstream 5818 true Chr02: 44541847-44547664 Phaseolus vulgaris
Phvul.002G275600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44541847-44542846 Phaseolus vulgaris
Phvul.002G275600 1.0kb downstream 1.0kb downstream 5818 true Chr02: 44542847-44548664 Phaseolus vulgaris
Phvul.002G275600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44547665-44548664 Phaseolus vulgaris
Phvul.002G275600 2.0kb upstream 2.0kb upstream 6818 true Chr02: 44540847-44547664 Phaseolus vulgaris
Phvul.002G275600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44540847-44542846 Phaseolus vulgaris
Phvul.002G275600 2.0kb downstream 2.0kb downstream 6818 true Chr02: 44542847-44549664 Phaseolus vulgaris
Phvul.002G275600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44547665-44549664 Phaseolus vulgaris
Phvul.002G275600 5.0kb upstream 5.0kb upstream 9818 true Chr02: 44537847-44547664 Phaseolus vulgaris
Phvul.002G275600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44537847-44542846 Phaseolus vulgaris
Phvul.002G275600 5.0kb downstream 5.0kb downstream 9818 true Chr02: 44542847-44552664 Phaseolus vulgaris
Phvul.002G275600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44547665-44552664 Phaseolus vulgaris
Phvul.002G275600 10.0kb upstream 10.0kb upstream 14818 true Chr02: 44532847-44547664 Phaseolus vulgaris
Phvul.002G275600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44532847-44542846 Phaseolus vulgaris
Phvul.002G275600 10.0kb downstream 10.0kb downstream 14818 true Chr02: 44542847-44557664 Phaseolus vulgaris
Phvul.002G275600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44547665-44557664 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307781 5265 Fabidae View MSA
124064552 5270 Rosid View MSA
123736463 5271 Pentapetalae View MSA
122787892 5272 Eudicot View MSA
122042491 5273 Angiosperm View MSA
121344748 5274 Embryophyte View MSA
123426339 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.64189 0.0 32.6827    
cufflinks 6.15053 0.0 20.2681    
cufflinks 32.0882 0.0 104.29   High
cufflinks 17.1586 0.0 56.4182   High
cufflinks 4.84988 0.0 16.5043    
cufflinks 14.597 0.0 47.0457    
cufflinks 1.90593 0.0 8.02362   Low
cufflinks 2.95623 0.0 11.5244    
cufflinks 1.74083 0.0 7.54112   Low
cufflinks 5.39842 0.0 17.7626    
cufflinks 4.08978 0.0 14.3761    

0 Strain