Gene : Phvul.002G277100 P. vulgaris v2.1
Defline:  (1 of 11) KOG2922 - Uncharacterized conserved protein Genomic Order:  2749
Name:  ? Phvul.002G277100 Secondary Identifier:  ? PAC:37176286
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G277100 0.5kb upstream 0.5kb upstream 6145 true Chr02: 44670635-44676779 Phaseolus vulgaris
Phvul.002G277100 0.5kb upstream 0.5kb upstream 500 false Chr02: 44676280-44676779 Phaseolus vulgaris
Phvul.002G277100 0.5kb downstream 0.5kb downstream 6145 true Chr02: 44670135-44676279 Phaseolus vulgaris
Phvul.002G277100 0.5kb downstream 0.5kb downstream 500 false Chr02: 44670135-44670634 Phaseolus vulgaris
Phvul.002G277100 1.0kb upstream 1.0kb upstream 6645 true Chr02: 44670635-44677279 Phaseolus vulgaris
Phvul.002G277100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44676280-44677279 Phaseolus vulgaris
Phvul.002G277100 1.0kb downstream 1.0kb downstream 6645 true Chr02: 44669635-44676279 Phaseolus vulgaris
Phvul.002G277100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44669635-44670634 Phaseolus vulgaris
Phvul.002G277100 2.0kb upstream 2.0kb upstream 7645 true Chr02: 44670635-44678279 Phaseolus vulgaris
Phvul.002G277100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44676280-44678279 Phaseolus vulgaris
Phvul.002G277100 2.0kb downstream 2.0kb downstream 7645 true Chr02: 44668635-44676279 Phaseolus vulgaris
Phvul.002G277100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44668635-44670634 Phaseolus vulgaris
Phvul.002G277100 5.0kb upstream 5.0kb upstream 10645 true Chr02: 44670635-44681279 Phaseolus vulgaris
Phvul.002G277100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44676280-44681279 Phaseolus vulgaris
Phvul.002G277100 5.0kb downstream 5.0kb downstream 10645 true Chr02: 44665635-44676279 Phaseolus vulgaris
Phvul.002G277100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44665635-44670634 Phaseolus vulgaris
Phvul.002G277100 10.0kb upstream 10.0kb upstream 15645 true Chr02: 44670635-44686279 Phaseolus vulgaris
Phvul.002G277100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44676280-44686279 Phaseolus vulgaris
Phvul.002G277100 10.0kb downstream 10.0kb downstream 15645 true Chr02: 44660635-44676279 Phaseolus vulgaris
Phvul.002G277100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44660635-44670634 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309635 5265 Fabidae View MSA
124074808 5270 Rosid View MSA
123742367 5271 Pentapetalae View MSA
122795464 5272 Eudicot View MSA
122048593 5273 Angiosperm View MSA
121350958 5274 Embryophyte View MSA
123428746 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.79544 0.0 14.2513    
cufflinks 5.26156 0.0 15.4862    
cufflinks 4.45603 0.0 13.3228    
cufflinks 5.60898 0.0 16.4483   High
cufflinks 2.73654 0.0 8.68057   Low
cufflinks 4.96223 0.0 14.7064    
cufflinks 4.55566 0.0 13.6467    
cufflinks 4.30034 0.0 12.894    
cufflinks 3.62325 0.0 11.1884    
cufflinks 4.72956 0.0 14.0655    
cufflinks 3.39282 0.0 10.5245   Low

0 Strain