Gene : Phvul.002G275900 P. vulgaris v2.1
Defline:  (1 of 10) PTHR13691 - RIBOSOMAL PROTEIN L2 Genomic Order:  2735
Name:  ? Phvul.002G275900 Secondary Identifier:  ? PAC:37174774
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G275900 0.5kb upstream 0.5kb upstream 8341 true Chr02: 44565841-44574181 Phaseolus vulgaris
Phvul.002G275900 0.5kb upstream 0.5kb upstream 500 false Chr02: 44565841-44566340 Phaseolus vulgaris
Phvul.002G275900 0.5kb downstream 0.5kb downstream 8341 true Chr02: 44566341-44574681 Phaseolus vulgaris
Phvul.002G275900 0.5kb downstream 0.5kb downstream 500 false Chr02: 44574182-44574681 Phaseolus vulgaris
Phvul.002G275900 1.0kb upstream 1.0kb upstream 8841 true Chr02: 44565341-44574181 Phaseolus vulgaris
Phvul.002G275900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44565341-44566340 Phaseolus vulgaris
Phvul.002G275900 1.0kb downstream 1.0kb downstream 8841 true Chr02: 44566341-44575181 Phaseolus vulgaris
Phvul.002G275900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44574182-44575181 Phaseolus vulgaris
Phvul.002G275900 2.0kb upstream 2.0kb upstream 9841 true Chr02: 44564341-44574181 Phaseolus vulgaris
Phvul.002G275900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44564341-44566340 Phaseolus vulgaris
Phvul.002G275900 2.0kb downstream 2.0kb downstream 9841 true Chr02: 44566341-44576181 Phaseolus vulgaris
Phvul.002G275900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44574182-44576181 Phaseolus vulgaris
Phvul.002G275900 5.0kb upstream 5.0kb upstream 12841 true Chr02: 44561341-44574181 Phaseolus vulgaris
Phvul.002G275900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44561341-44566340 Phaseolus vulgaris
Phvul.002G275900 5.0kb downstream 5.0kb downstream 12841 true Chr02: 44566341-44579181 Phaseolus vulgaris
Phvul.002G275900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44574182-44579181 Phaseolus vulgaris
Phvul.002G275900 10.0kb upstream 10.0kb upstream 17841 true Chr02: 44556341-44574181 Phaseolus vulgaris
Phvul.002G275900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44556341-44566340 Phaseolus vulgaris
Phvul.002G275900 10.0kb downstream 10.0kb downstream 17841 true Chr02: 44566341-44584181 Phaseolus vulgaris
Phvul.002G275900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44574182-44584181 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302397 5265 Fabidae View MSA
124066286 5270 Rosid View MSA
123753732 5271 Pentapetalae View MSA
122797122 5272 Eudicot View MSA
122049375 5273 Angiosperm View MSA
123428909 5275 Viridiplantae View MSA
121350673 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.667 0.0 72.8    
cufflinks 30.1213 0.0 85.6367    
cufflinks 31.7143 0.0 90.115   High
cufflinks 43.4591 0.0 135.38 High High
cufflinks 19.2106 0.0 58.3362    
cufflinks 24.9417 0.0 85.1386    
cufflinks 11.6492 0.0 37.6339   Low
cufflinks 16.5083 0.0 59.899    
cufflinks 13.9738 0.0 43.9213    
cufflinks 10.7952 0.0 35.6553   Low
cufflinks 21.7666 0.0 64.6487    

0 Strain