Gene : Phvul.002G276100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31580:SF5 - FILAMENT-LIKE PLANT PROTEIN 3 Genomic Order:  2738
Name:  ? Phvul.002G276100 Secondary Identifier:  ? PAC:37176721
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G276100 0.5kb upstream 0.5kb upstream 4890 true Chr02: 44581586-44586475 Phaseolus vulgaris
Phvul.002G276100 0.5kb upstream 0.5kb upstream 500 false Chr02: 44585976-44586475 Phaseolus vulgaris
Phvul.002G276100 0.5kb downstream 0.5kb downstream 4890 true Chr02: 44581086-44585975 Phaseolus vulgaris
Phvul.002G276100 0.5kb downstream 0.5kb downstream 500 false Chr02: 44581086-44581585 Phaseolus vulgaris
Phvul.002G276100 1.0kb upstream 1.0kb upstream 5390 true Chr02: 44581586-44586975 Phaseolus vulgaris
Phvul.002G276100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44585976-44586975 Phaseolus vulgaris
Phvul.002G276100 1.0kb downstream 1.0kb downstream 5390 true Chr02: 44580586-44585975 Phaseolus vulgaris
Phvul.002G276100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44580586-44581585 Phaseolus vulgaris
Phvul.002G276100 2.0kb upstream 2.0kb upstream 6390 true Chr02: 44581586-44587975 Phaseolus vulgaris
Phvul.002G276100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44585976-44587975 Phaseolus vulgaris
Phvul.002G276100 2.0kb downstream 2.0kb downstream 6390 true Chr02: 44579586-44585975 Phaseolus vulgaris
Phvul.002G276100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44579586-44581585 Phaseolus vulgaris
Phvul.002G276100 5.0kb upstream 5.0kb upstream 9390 true Chr02: 44581586-44590975 Phaseolus vulgaris
Phvul.002G276100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44585976-44590975 Phaseolus vulgaris
Phvul.002G276100 5.0kb downstream 5.0kb downstream 9390 true Chr02: 44576586-44585975 Phaseolus vulgaris
Phvul.002G276100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44576586-44581585 Phaseolus vulgaris
Phvul.002G276100 10.0kb upstream 10.0kb upstream 14390 true Chr02: 44581586-44595975 Phaseolus vulgaris
Phvul.002G276100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44585976-44595975 Phaseolus vulgaris
Phvul.002G276100 10.0kb downstream 10.0kb downstream 14390 true Chr02: 44571586-44585975 Phaseolus vulgaris
Phvul.002G276100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44571586-44581585 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303492 5265 Fabidae View MSA
124071762 5270 Rosid View MSA
123742978 5271 Pentapetalae View MSA
122791145 5272 Eudicot View MSA
122043487 5273 Angiosperm View MSA
121310135 5274 Embryophyte View MSA
123347707 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.61987 0.0 15.2642    
cufflinks 2.4926 0.0 7.32908   Low
cufflinks 3.383 0.0 9.59383    
cufflinks 3.16396 0.0 9.17969    
cufflinks 2.53126 0.0 7.50357   Low
cufflinks 2.7749 0.0 8.0559    
cufflinks 5.71397 0.0 15.4989    
cufflinks 3.96224 0.0 11.0676    
cufflinks 6.76876 0.0 18.1356   High
cufflinks 7.39848 0.0 19.716   High
cufflinks 3.347 0.0 9.57983    

0 Strain