Gene : Phvul.002G278104 P. vulgaris v2.1
Defline:  (1 of 2) K02634 - apocytochrome f (petA) Genomic Order:  2761
Name:  ? Phvul.002G278104 Secondary Identifier:  ? PAC:37178175
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G278104 0.5kb upstream 0.5kb upstream 1463 true Chr02: 44780029-44781491 Phaseolus vulgaris
Phvul.002G278104 0.5kb upstream 0.5kb upstream 500 false Chr02: 44780992-44781491 Phaseolus vulgaris
Phvul.002G278104 0.5kb downstream 0.5kb downstream 1463 true Chr02: 44779529-44780991 Phaseolus vulgaris
Phvul.002G278104 0.5kb downstream 0.5kb downstream 500 false Chr02: 44779529-44780028 Phaseolus vulgaris
Phvul.002G278104 1.0kb upstream 1.0kb upstream 1963 true Chr02: 44780029-44781991 Phaseolus vulgaris
Phvul.002G278104 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44780992-44781991 Phaseolus vulgaris
Phvul.002G278104 1.0kb downstream 1.0kb downstream 1963 true Chr02: 44779029-44780991 Phaseolus vulgaris
Phvul.002G278104 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44779029-44780028 Phaseolus vulgaris
Phvul.002G278104 2.0kb upstream 2.0kb upstream 2963 true Chr02: 44780029-44782991 Phaseolus vulgaris
Phvul.002G278104 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44780992-44782991 Phaseolus vulgaris
Phvul.002G278104 2.0kb downstream 2.0kb downstream 2963 true Chr02: 44778029-44780991 Phaseolus vulgaris
Phvul.002G278104 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44778029-44780028 Phaseolus vulgaris
Phvul.002G278104 5.0kb upstream 5.0kb upstream 5963 true Chr02: 44780029-44785991 Phaseolus vulgaris
Phvul.002G278104 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44780992-44785991 Phaseolus vulgaris
Phvul.002G278104 5.0kb downstream 5.0kb downstream 5963 true Chr02: 44775029-44780991 Phaseolus vulgaris
Phvul.002G278104 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44775029-44780028 Phaseolus vulgaris
Phvul.002G278104 10.0kb upstream 10.0kb upstream 10963 true Chr02: 44780029-44790991 Phaseolus vulgaris
Phvul.002G278104 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44780992-44790991 Phaseolus vulgaris
Phvul.002G278104 10.0kb downstream 10.0kb downstream 10963 true Chr02: 44770029-44780991 Phaseolus vulgaris
Phvul.002G278104 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44770029-44780028 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296640 5265 Fabidae View MSA
124050483 5270 Rosid View MSA
123752202 5271 Pentapetalae View MSA
122795112 5272 Eudicot View MSA
122046539 5273 Angiosperm View MSA
121351197 5274 Embryophyte View MSA
123425549 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.34539 0.0 15.4183    
cufflinks 1.70267 0.0 12.598    
cufflinks 17.1098 0.0 136.421   High
cufflinks 16.4873 0.0 69.1673   High
cufflinks 6.77756 0.0 31.6356    
cufflinks 35.1194 0.0 183.816 High High
cufflinks 0.385699 0.0 3.34553 Low Low
cufflinks 1.20766 0.0 8.01482    
cufflinks 0.796957 0.0 5.32099   Low
cufflinks 11.6127 0.0 47.0306    
cufflinks 1.72859 0.0 10.2683    

0 Strain