Gene : Phvul.002G279300 P. vulgaris v2.1
Defline:  (1 of 4) PTHR24349:SF166 - CALCIUM-DEPENDENT PROTEIN KINASE 11-RELATED Genomic Order:  2774
Name:  ? Phvul.002G279300 Secondary Identifier:  ? PAC:37174743
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G279300 0.5kb upstream 0.5kb upstream 5872 true Chr02: 44865507-44871378 Phaseolus vulgaris
Phvul.002G279300 0.5kb upstream 0.5kb upstream 500 false Chr02: 44865507-44866006 Phaseolus vulgaris
Phvul.002G279300 0.5kb downstream 0.5kb downstream 5872 true Chr02: 44866007-44871878 Phaseolus vulgaris
Phvul.002G279300 0.5kb downstream 0.5kb downstream 500 false Chr02: 44871379-44871878 Phaseolus vulgaris
Phvul.002G279300 1.0kb upstream 1.0kb upstream 6372 true Chr02: 44865007-44871378 Phaseolus vulgaris
Phvul.002G279300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44865007-44866006 Phaseolus vulgaris
Phvul.002G279300 1.0kb downstream 1.0kb downstream 6372 true Chr02: 44866007-44872378 Phaseolus vulgaris
Phvul.002G279300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44871379-44872378 Phaseolus vulgaris
Phvul.002G279300 2.0kb upstream 2.0kb upstream 7372 true Chr02: 44864007-44871378 Phaseolus vulgaris
Phvul.002G279300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44864007-44866006 Phaseolus vulgaris
Phvul.002G279300 2.0kb downstream 2.0kb downstream 7372 true Chr02: 44866007-44873378 Phaseolus vulgaris
Phvul.002G279300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44871379-44873378 Phaseolus vulgaris
Phvul.002G279300 5.0kb upstream 5.0kb upstream 10372 true Chr02: 44861007-44871378 Phaseolus vulgaris
Phvul.002G279300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44861007-44866006 Phaseolus vulgaris
Phvul.002G279300 5.0kb downstream 5.0kb downstream 10372 true Chr02: 44866007-44876378 Phaseolus vulgaris
Phvul.002G279300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44871379-44876378 Phaseolus vulgaris
Phvul.002G279300 10.0kb upstream 10.0kb upstream 15372 true Chr02: 44856007-44871378 Phaseolus vulgaris
Phvul.002G279300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44856007-44866006 Phaseolus vulgaris
Phvul.002G279300 10.0kb downstream 10.0kb downstream 15372 true Chr02: 44866007-44881378 Phaseolus vulgaris
Phvul.002G279300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44871379-44881378 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311045 5265 Fabidae View MSA
124069708 5270 Rosid View MSA
123741053 5271 Pentapetalae View MSA
122787584 5272 Eudicot View MSA
122047311 5273 Angiosperm View MSA
121310726 5274 Embryophyte View MSA
123427978 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.6877 0.0 40.5808   Low
cufflinks 16.4189 0.0 42.4519   Low
cufflinks 20.8122 0.0 53.8388    
cufflinks 19.8649 0.0 51.3571    
cufflinks 30.9486 0.0 80.8724   High
cufflinks 18.8843 0.0 48.8207    
cufflinks 23.9562 0.0 62.2277    
cufflinks 15.4552 0.0 39.9758   Low
cufflinks 30.1937 0.0 79.1554 High High
cufflinks 19.8311 0.0 51.2755    
cufflinks 30.1246 0.0 78.7861   High

0 Strain