Gene : Phvul.002G279400 P. vulgaris v2.1
Defline:  (1 of 39) PF05678 - VQ motif (VQ) Genomic Order:  2775
Name:  ? Phvul.002G279400 Secondary Identifier:  ? PAC:37176598
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G279400 0.5kb upstream 0.5kb upstream 2931 true Chr02: 44875876-44878806 Phaseolus vulgaris
Phvul.002G279400 0.5kb upstream 0.5kb upstream 500 false Chr02: 44878307-44878806 Phaseolus vulgaris
Phvul.002G279400 0.5kb downstream 0.5kb downstream 2931 true Chr02: 44875376-44878306 Phaseolus vulgaris
Phvul.002G279400 0.5kb downstream 0.5kb downstream 500 false Chr02: 44875376-44875875 Phaseolus vulgaris
Phvul.002G279400 1.0kb upstream 1.0kb upstream 3431 true Chr02: 44875876-44879306 Phaseolus vulgaris
Phvul.002G279400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44878307-44879306 Phaseolus vulgaris
Phvul.002G279400 1.0kb downstream 1.0kb downstream 3431 true Chr02: 44874876-44878306 Phaseolus vulgaris
Phvul.002G279400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44874876-44875875 Phaseolus vulgaris
Phvul.002G279400 2.0kb upstream 2.0kb upstream 4431 true Chr02: 44875876-44880306 Phaseolus vulgaris
Phvul.002G279400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44878307-44880306 Phaseolus vulgaris
Phvul.002G279400 2.0kb downstream 2.0kb downstream 4431 true Chr02: 44873876-44878306 Phaseolus vulgaris
Phvul.002G279400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44873876-44875875 Phaseolus vulgaris
Phvul.002G279400 5.0kb upstream 5.0kb upstream 7431 true Chr02: 44875876-44883306 Phaseolus vulgaris
Phvul.002G279400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44878307-44883306 Phaseolus vulgaris
Phvul.002G279400 5.0kb downstream 5.0kb downstream 7431 true Chr02: 44870876-44878306 Phaseolus vulgaris
Phvul.002G279400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44870876-44875875 Phaseolus vulgaris
Phvul.002G279400 10.0kb upstream 10.0kb upstream 12431 true Chr02: 44875876-44888306 Phaseolus vulgaris
Phvul.002G279400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44878307-44888306 Phaseolus vulgaris
Phvul.002G279400 10.0kb downstream 10.0kb downstream 12431 true Chr02: 44865876-44878306 Phaseolus vulgaris
Phvul.002G279400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44865876-44875875 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309756 5265 Fabidae View MSA
124071796 5270 Rosid View MSA
123750842 5271 Pentapetalae View MSA
122795090 5272 Eudicot View MSA
122046673 5273 Angiosperm View MSA
121347985 5274 Embryophyte View MSA
123380701 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.326973 0.0 1.37825 Low  
cufflinks 0.1191 0.0 0.563435 Low  
cufflinks 1.16698 0.0 5.35547    
cufflinks 0.236775 0.0 1.03117 Low  
cufflinks 2.69548 0.0 14.6446   High
cufflinks 1.28213 0.0 6.00509    
cufflinks 0.136819 0.0 0.63071 Low  
cufflinks 0.198985 0.0 0.891889 Low  
cufflinks 0.146328 0.0 0.67526 Low  
cufflinks 0.0343715 0.0 0.229888 Low Low
cufflinks 2.10343 0.0 12.183   High

0 Strain