Gene : Phvul.002G266500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR15840 - CGI-121 FAMILY MEMBER Genomic Order:  2640
Name:  ? Phvul.002G266500 Secondary Identifier:  ? PAC:37177972
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G266500 0.5kb upstream 0.5kb upstream 2677 true Chr02: 43782923-43785599 Phaseolus vulgaris
Phvul.002G266500 0.5kb upstream 0.5kb upstream 500 false Chr02: 43785100-43785599 Phaseolus vulgaris
Phvul.002G266500 0.5kb downstream 0.5kb downstream 2677 true Chr02: 43782423-43785099 Phaseolus vulgaris
Phvul.002G266500 0.5kb downstream 0.5kb downstream 500 false Chr02: 43782423-43782922 Phaseolus vulgaris
Phvul.002G266500 1.0kb upstream 1.0kb upstream 3177 true Chr02: 43782923-43786099 Phaseolus vulgaris
Phvul.002G266500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 43785100-43786099 Phaseolus vulgaris
Phvul.002G266500 1.0kb downstream 1.0kb downstream 3177 true Chr02: 43781923-43785099 Phaseolus vulgaris
Phvul.002G266500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 43781923-43782922 Phaseolus vulgaris
Phvul.002G266500 2.0kb upstream 2.0kb upstream 4177 true Chr02: 43782923-43787099 Phaseolus vulgaris
Phvul.002G266500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 43785100-43787099 Phaseolus vulgaris
Phvul.002G266500 2.0kb downstream 2.0kb downstream 4177 true Chr02: 43780923-43785099 Phaseolus vulgaris
Phvul.002G266500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 43780923-43782922 Phaseolus vulgaris
Phvul.002G266500 5.0kb upstream 5.0kb upstream 7177 true Chr02: 43782923-43790099 Phaseolus vulgaris
Phvul.002G266500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 43785100-43790099 Phaseolus vulgaris
Phvul.002G266500 5.0kb downstream 5.0kb downstream 7177 true Chr02: 43777923-43785099 Phaseolus vulgaris
Phvul.002G266500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 43777923-43782922 Phaseolus vulgaris
Phvul.002G266500 10.0kb upstream 10.0kb upstream 12177 true Chr02: 43782923-43795099 Phaseolus vulgaris
Phvul.002G266500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 43785100-43795099 Phaseolus vulgaris
Phvul.002G266500 10.0kb downstream 10.0kb downstream 12177 true Chr02: 43772923-43785099 Phaseolus vulgaris
Phvul.002G266500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 43772923-43782922 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026161 5273 Angiosperm View MSA
122307041 5265 Fabidae View MSA
124060531 5270 Rosid View MSA
123741056 5271 Pentapetalae View MSA
122787559 5272 Eudicot View MSA
121345637 5274 Embryophyte View MSA
123425208 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.445463 0.0 1.84801   Low
cufflinks 1.91585 0.0 16.5161    
cufflinks 1.78416 0.0 12.9226    
cufflinks 1.01562 0.0 4.00905    
cufflinks 0.635842 0.0 2.59852   Low
cufflinks 1.77469 0.0 13.1125    
cufflinks 1.40245 0.0 10.1357    
cufflinks 2.24991 0.0 19.9227   High
cufflinks 1.15943 0.0 7.89411    
cufflinks 2.19726 0.0 15.2874   High
cufflinks 1.31878 0.0 9.27884    

0 Strain