Gene : Phvul.002G268100 P. vulgaris v2.1
Genomic Order:  2656 Name:  ? Phvul.002G268100
Secondary Identifier:  ? PAC:37177147
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G268100 0.5kb upstream 0.5kb upstream 1358 true Chr02: 43892571-43893928 Phaseolus vulgaris
Phvul.002G268100 0.5kb upstream 0.5kb upstream 500 false Chr02: 43893429-43893928 Phaseolus vulgaris
Phvul.002G268100 0.5kb downstream 0.5kb downstream 1358 true Chr02: 43892071-43893428 Phaseolus vulgaris
Phvul.002G268100 0.5kb downstream 0.5kb downstream 500 false Chr02: 43892071-43892570 Phaseolus vulgaris
Phvul.002G268100 1.0kb upstream 1.0kb upstream 1858 true Chr02: 43892571-43894428 Phaseolus vulgaris
Phvul.002G268100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 43893429-43894428 Phaseolus vulgaris
Phvul.002G268100 1.0kb downstream 1.0kb downstream 1858 true Chr02: 43891571-43893428 Phaseolus vulgaris
Phvul.002G268100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 43891571-43892570 Phaseolus vulgaris
Phvul.002G268100 2.0kb upstream 2.0kb upstream 2858 true Chr02: 43892571-43895428 Phaseolus vulgaris
Phvul.002G268100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 43893429-43895428 Phaseolus vulgaris
Phvul.002G268100 2.0kb downstream 2.0kb downstream 2858 true Chr02: 43890571-43893428 Phaseolus vulgaris
Phvul.002G268100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 43890571-43892570 Phaseolus vulgaris
Phvul.002G268100 5.0kb upstream 5.0kb upstream 5858 true Chr02: 43892571-43898428 Phaseolus vulgaris
Phvul.002G268100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 43893429-43898428 Phaseolus vulgaris
Phvul.002G268100 5.0kb downstream 5.0kb downstream 5858 true Chr02: 43887571-43893428 Phaseolus vulgaris
Phvul.002G268100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 43887571-43892570 Phaseolus vulgaris
Phvul.002G268100 10.0kb upstream 10.0kb upstream 10858 true Chr02: 43892571-43903428 Phaseolus vulgaris
Phvul.002G268100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 43893429-43903428 Phaseolus vulgaris
Phvul.002G268100 10.0kb downstream 10.0kb downstream 10858 true Chr02: 43882571-43893428 Phaseolus vulgaris
Phvul.002G268100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 43882571-43892570 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121673259 5273 Angiosperm View MSA
122310990 5265 Fabidae View MSA
124074266 5270 Rosid View MSA
123628534 5271 Pentapetalae View MSA
122662801 5272 Eudicot View MSA
120945149 5274 Embryophyte View MSA
122985544 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.038 0.0 34.7109   High
cufflinks 0.579764 0.0 2.27396    
cufflinks 0.161727 0.0 0.704885 Low Low
cufflinks 0.490368 0.0 1.96598 Low  
cufflinks 0.628341 0.0 2.47393    
cufflinks 0.183879 0.0 0.793423 Low Low
cufflinks 2.28409 0.0 7.94844    
cufflinks 1.90116 0.0 6.70435    
cufflinks 0.803758 0.0 3.07298    
cufflinks 4.19281 0.0 13.6841   High
cufflinks 0.606979 0.0 2.38435    

0 Strain