Gene : Phvul.002G273600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13533:SF5 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 14-RELATED Genomic Order:  2712
Name:  ? Phvul.002G273600 Secondary Identifier:  ? PAC:37177767
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G273600 0.5kb upstream 0.5kb upstream 6792 true Chr02: 44380398-44387189 Phaseolus vulgaris
Phvul.002G273600 0.5kb upstream 0.5kb upstream 500 false Chr02: 44386690-44387189 Phaseolus vulgaris
Phvul.002G273600 0.5kb downstream 0.5kb downstream 6792 true Chr02: 44379898-44386689 Phaseolus vulgaris
Phvul.002G273600 0.5kb downstream 0.5kb downstream 500 false Chr02: 44379898-44380397 Phaseolus vulgaris
Phvul.002G273600 1.0kb upstream 1.0kb upstream 7292 true Chr02: 44380398-44387689 Phaseolus vulgaris
Phvul.002G273600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44386690-44387689 Phaseolus vulgaris
Phvul.002G273600 1.0kb downstream 1.0kb downstream 7292 true Chr02: 44379398-44386689 Phaseolus vulgaris
Phvul.002G273600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44379398-44380397 Phaseolus vulgaris
Phvul.002G273600 2.0kb upstream 2.0kb upstream 8292 true Chr02: 44380398-44388689 Phaseolus vulgaris
Phvul.002G273600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44386690-44388689 Phaseolus vulgaris
Phvul.002G273600 2.0kb downstream 2.0kb downstream 8292 true Chr02: 44378398-44386689 Phaseolus vulgaris
Phvul.002G273600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44378398-44380397 Phaseolus vulgaris
Phvul.002G273600 5.0kb upstream 5.0kb upstream 11292 true Chr02: 44380398-44391689 Phaseolus vulgaris
Phvul.002G273600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44386690-44391689 Phaseolus vulgaris
Phvul.002G273600 5.0kb downstream 5.0kb downstream 11292 true Chr02: 44375398-44386689 Phaseolus vulgaris
Phvul.002G273600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44375398-44380397 Phaseolus vulgaris
Phvul.002G273600 10.0kb upstream 10.0kb upstream 16292 true Chr02: 44380398-44396689 Phaseolus vulgaris
Phvul.002G273600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44386690-44396689 Phaseolus vulgaris
Phvul.002G273600 10.0kb downstream 10.0kb downstream 16292 true Chr02: 44370398-44386689 Phaseolus vulgaris
Phvul.002G273600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44370398-44380397 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310420 5265 Fabidae View MSA
124073256 5270 Rosid View MSA
123736665 5271 Pentapetalae View MSA
122795116 5272 Eudicot View MSA
122045954 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121351071 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.77952 0.0 10.1695    
cufflinks 3.09971 0.0 11.0767    
cufflinks 4.3889 0.0 14.4757   High
cufflinks 3.04583 0.0 11.103    
cufflinks 3.14656 0.0 14.9351    
cufflinks 3.98979 0.0 13.5058   High
cufflinks 2.97043 0.0 12.883    
cufflinks 2.6964 0.0 12.852   Low
cufflinks 3.29006 0.0 13.7622    
cufflinks 4.51807 0.0 22.3917   High
cufflinks 2.92698 0.0 10.761    

0 Strain