Gene : Phvul.002G260800 P. vulgaris v2.1
Genomic Order:  2584 Name:  ? Phvul.002G260800
Secondary Identifier:  ? PAC:37178252
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G260800 0.5kb upstream 0.5kb upstream 1237 true Chr02: 43244806-43246042 Phaseolus vulgaris
Phvul.002G260800 0.5kb upstream 0.5kb upstream 500 false Chr02: 43244806-43245305 Phaseolus vulgaris
Phvul.002G260800 0.5kb downstream 0.5kb downstream 1237 true Chr02: 43245306-43246542 Phaseolus vulgaris
Phvul.002G260800 0.5kb downstream 0.5kb downstream 500 false Chr02: 43246043-43246542 Phaseolus vulgaris
Phvul.002G260800 1.0kb upstream 1.0kb upstream 1737 true Chr02: 43244306-43246042 Phaseolus vulgaris
Phvul.002G260800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 43244306-43245305 Phaseolus vulgaris
Phvul.002G260800 1.0kb downstream 1.0kb downstream 1737 true Chr02: 43245306-43247042 Phaseolus vulgaris
Phvul.002G260800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 43246043-43247042 Phaseolus vulgaris
Phvul.002G260800 2.0kb upstream 2.0kb upstream 2737 true Chr02: 43243306-43246042 Phaseolus vulgaris
Phvul.002G260800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 43243306-43245305 Phaseolus vulgaris
Phvul.002G260800 2.0kb downstream 2.0kb downstream 2737 true Chr02: 43245306-43248042 Phaseolus vulgaris
Phvul.002G260800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 43246043-43248042 Phaseolus vulgaris
Phvul.002G260800 5.0kb upstream 5.0kb upstream 5737 true Chr02: 43240306-43246042 Phaseolus vulgaris
Phvul.002G260800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 43240306-43245305 Phaseolus vulgaris
Phvul.002G260800 5.0kb downstream 5.0kb downstream 5737 true Chr02: 43245306-43251042 Phaseolus vulgaris
Phvul.002G260800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 43246043-43251042 Phaseolus vulgaris
Phvul.002G260800 10.0kb upstream 10.0kb upstream 10737 true Chr02: 43235306-43246042 Phaseolus vulgaris
Phvul.002G260800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 43235306-43245305 Phaseolus vulgaris
Phvul.002G260800 10.0kb downstream 10.0kb downstream 10737 true Chr02: 43245306-43256042 Phaseolus vulgaris
Phvul.002G260800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 43246043-43256042 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297709 5265 Fabidae View MSA
124071239 5270 Rosid View MSA
123750845 5271 Pentapetalae View MSA
122791847 5272 Eudicot View MSA
122049907 5273 Angiosperm View MSA
121311645 5274 Embryophyte View MSA
123348915 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.607446 0.0 2.4185    
cufflinks 0.567385 0.0 2.27128    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.434408 0.0 1.77277 Low  
cufflinks 0.108148 0.0 0.507815 Low  
cufflinks 0.0770416 0.0 0.371457 Low Low
cufflinks 3.08514 0.0 10.6081   High
cufflinks 2.80542 0.0 9.74272   High
cufflinks 0.348262 0.0 1.44453 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.061664 0.0 0.305918 Low Low

0 Strain