Gene : Phvul.002G259400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR32091:SF0 - EUKARYOTIC INITIATION FACTOR 4B-RELATED Genomic Order:  2570
Name:  ? Phvul.002G259400 Secondary Identifier:  ? PAC:37177620
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G259400 0.5kb upstream 0.5kb upstream 7085 true Chr02: 43077651-43084735 Phaseolus vulgaris
Phvul.002G259400 0.5kb upstream 0.5kb upstream 500 false Chr02: 43077651-43078150 Phaseolus vulgaris
Phvul.002G259400 0.5kb downstream 0.5kb downstream 7085 true Chr02: 43078151-43085235 Phaseolus vulgaris
Phvul.002G259400 0.5kb downstream 0.5kb downstream 500 false Chr02: 43084736-43085235 Phaseolus vulgaris
Phvul.002G259400 1.0kb upstream 1.0kb upstream 7585 true Chr02: 43077151-43084735 Phaseolus vulgaris
Phvul.002G259400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 43077151-43078150 Phaseolus vulgaris
Phvul.002G259400 1.0kb downstream 1.0kb downstream 7585 true Chr02: 43078151-43085735 Phaseolus vulgaris
Phvul.002G259400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 43084736-43085735 Phaseolus vulgaris
Phvul.002G259400 2.0kb upstream 2.0kb upstream 8585 true Chr02: 43076151-43084735 Phaseolus vulgaris
Phvul.002G259400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 43076151-43078150 Phaseolus vulgaris
Phvul.002G259400 2.0kb downstream 2.0kb downstream 8585 true Chr02: 43078151-43086735 Phaseolus vulgaris
Phvul.002G259400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 43084736-43086735 Phaseolus vulgaris
Phvul.002G259400 5.0kb upstream 5.0kb upstream 11585 true Chr02: 43073151-43084735 Phaseolus vulgaris
Phvul.002G259400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 43073151-43078150 Phaseolus vulgaris
Phvul.002G259400 5.0kb downstream 5.0kb downstream 11585 true Chr02: 43078151-43089735 Phaseolus vulgaris
Phvul.002G259400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 43084736-43089735 Phaseolus vulgaris
Phvul.002G259400 10.0kb upstream 10.0kb upstream 16585 true Chr02: 43068151-43084735 Phaseolus vulgaris
Phvul.002G259400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 43068151-43078150 Phaseolus vulgaris
Phvul.002G259400 10.0kb downstream 10.0kb downstream 16585 true Chr02: 43078151-43094735 Phaseolus vulgaris
Phvul.002G259400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 43084736-43094735 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299423 5265 Fabidae View MSA
124064009 5270 Rosid View MSA
123749335 5271 Pentapetalae View MSA
122788320 5272 Eudicot View MSA
122051385 5273 Angiosperm View MSA
121351135 5274 Embryophyte View MSA
123426003 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.4559 0.0 72.7353   Low
cufflinks 31.2022 0.0 83.3677    
cufflinks 46.2683 0.0 126.805 High High
cufflinks 36.059 0.0 97.272 High  
cufflinks 46.0509 0.0 127.932 High High
cufflinks 35.4686 0.0 95.637 High  
cufflinks 35.3724 0.0 96.4262 High  
cufflinks 38.8611 0.0 106.037 High  
cufflinks 45.9468 0.0 128.184 High High
cufflinks 30.2913 0.0 80.9091   Low
cufflinks 46.1408 0.0 128.784 High High

0 Strain